KEGG   Takifugu rubripes (torafugu): 445951
Entry
445951            CDS       T02386                                 
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X2
  KO
K09276  Y-box-binding protein 1
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tru03000]
    445951 (ybx1)
   03019 Messenger RNA biogenesis [BR:tru03019]
    445951 (ybx1)
   03041 Spliceosome [BR:tru03041]
    445951 (ybx1)
Transcription factors [BR:tru03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    445951 (ybx1)
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     445951 (ybx1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     445951 (ybx1)
Spliceosome [BR:tru03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    445951 (ybx1)
SSDB
Motif
Pfam: CSD OB_RNB
Other DBs
NCBI-GeneID: 445951
NCBI-ProteinID: XP_003963190
Ensembl: ENSTRUG00000024170
UniProt: A0A3B5KFS8
Position
3:7137079..7140933
AA seq 298 aa
MSSEAETQQAPQPAADEEGPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAA
DRNRYRRFPRRRGPPRGGDYPENYQSDGEGEPGSGGHDKSSGGENAPEGDSQQQRRPTYP
GRRRYPPYFGGEGDDNQGGPEQGNRPARQYYRGFRPRFRPRGPPRPRPVRDGEEDKENQG
GEGGQNQQPRQRRSRQNYRRRRPQTGGKPGPETKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq 897 nt   +upstreamnt  +downstreamnt
atgagcagcgaggccgagacacaacaagcgccgcagcctgctgccgatgaggagggacca
tccagcccggcagccgcagcttctgcgggggataagaaggtcatcgcaacaaaagtcttg
ggtacagtcaaatggttcaacgtcaggaatggatatggttttatcaacaggaatgacaca
aaagaagatgtgtttgttcaccagacggcaatcaagaagaacaaccccaggaagtacctc
cgtagtgtaggagatggagagactgtagaatttgatgttgttgagggggagaagggagca
gaggcggcaaatgttaccgggccagggggggtcgcagtccagggtagcaaatacgccgca
gacaggaaccgctacagacgctttccacggcggaggggccctcctcgcggtggcgactac
ccagagaactaccagagtgacggggagggtgagccaggcagcggaggccacgacaaaagc
agtgggggagagaacgcccctgaaggagactcgcagcaacagcgcagacccacctacccc
ggcagacggcgttaccctccatattttggaggcgaaggtgacgacaaccagggaggtcca
gaacagggcaacagaccagcaaggcagtactacagaggcttccgaccaagattcagaccc
aggggcccacctcgtcccagaccggtgagggacggcgaggaggacaaggagaaccagggc
ggcgaaggtggtcagaaccaacagccacgccagcggcgttcccgtcagaactaccgccgc
agacgtccacagactggcggcaaacccggcccggagaccaaggaggccaagacaggaggt
gacccatccgcagagaaaacgtccgctcccgaggcccagcagggtggggctgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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