KEGG   Treponema vincentii: GWP43_02380
Entry
GWP43_02380       CDS       T06435                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
trz  Treponema vincentii
Pathway
trz00300  Lysine biosynthesis
trz00550  Peptidoglycan biosynthesis
trz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:trz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GWP43_02380
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    GWP43_02380
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:trz01011]
    GWP43_02380
Enzymes [BR:trz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     GWP43_02380
Peptidoglycan biosynthesis and degradation proteins [BR:trz01011]
 Precursor biosynthesis
  Amino acid ligase
   GWP43_02380
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: QHX42482
UniProt: A0A6P1Y0N1
Position
509450..511048
AA seq 532 aa
MCNNRYAKSILQCLFSIEPIEVHGADVTVHSLSYDSREVQTGAAFFALPGVHTDGSKFID
AAIAKGAVAVIHEKTLPLYQEHICYVQVPDVRAAMAAAAAVFFDEPSKDLVTIGVTGTEG
KTSTVDFIWQLLRLAGKKAGFSSTVSFSFGDESVANPAHQTTPESITVQERLARMRDNGC
EYAVVEASSHGLSPRTARLLHVHFDAGIFMNVTQEHLEFHGTFEQYRYDKANLFRSLDTH
DHKKKNGMVAAFGIVNLEDPSAAYFAQATNQPVFGFSVRKNIDGAAAAVPFSNFAGGLSA
DNIHEGENSLTFTIHASLNGVQKTYEAAASVTGFFNVYNILASLIAIHNLTGLSFDMLVP
LLNRLVPVRGRMCRVEAGQRFEVLIDYAHTPSSFQAIMPSVRDRIKAKGGRVIAVFGSGG
ERDTVKRPEQGRIAGEYCDTIILTDEDPRGEDPVELLEMIAAGCPNKKRGEELFIIPDRS
AAVRKAFSLAQPNDAVLLLGKGHENSIIGKNGTVPYDEYTEAHNALRELQDF
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtgtaataaccgctatgcaaaatcaattcttcaatgtcttttttctatagagccgata
gaagtgcacggggcagatgttacggtgcattcgctttcgtatgattcgcgtgaagtacaa
acgggagctgctttttttgccttgcccggggtgcataccgatggttcaaagtttatcgat
gcggctattgcgaagggtgccgttgcggttattcatgaaaaaacgcttccattatatcaa
gagcatatttgttacgttcaagtgccggatgttcgcgctgcaatggccgctgcggctgcc
gttttttttgacgaaccttccaaagacttggtaacgatcggagtaaccggtacggaagga
aaaacgagtaccgtcgattttatctggcagctgctgcggcttgccggaaaaaaggcaggg
ttttcttcgaccgtatctttttcgtttggagatgagtcggtcgccaatccggcgcatcag
actacccccgaatcgattacggtgcaggaacggcttgcccgtatgcgggataacggctgc
gaatacgccgttgtggaagcatcttctcacgggctttctccccgaacggcgcggctattg
catgtgcatttcgatgcaggcatatttatgaatgtgacgcaagaacatttggaatttcac
ggtacctttgaacaataccgctacgataaagcgaatttatttcggtcattagatacccat
gaccataagaaaaaaaacggaatggttgcggccttcggtatcgtcaatcttgaagatccg
tctgccgcctattttgcacaggcaacaaatcagcccgtattcggattttccgtgcgaaaa
aatatcgatggcgctgctgcggctgttccgttctcaaactttgcaggcggcttatcggct
gataacattcatgaaggggagaacagtttaacctttaccattcacgcatcgttgaacggt
gtgcaaaaaacgtatgaggccgccgcttcggtaaccggcttttttaatgtgtacaatatt
cttgcttctcttattgccattcataatttaacgggactgtcgtttgatatgcttgtgccg
ttgctgaatcggcttgtaccggtaagggggagaatgtgccgtgttgaagcgggacagcgc
tttgaggtgcttatcgattatgcgcatacgccgtcatcattccaagcgattatgccgtct
gttcgtgaccgtattaaagcgaaaggcggccgcgtgattgccgtattcggttcgggcgga
gagcgcgataccgttaagcggccggagcagggaagaattgccggagaatactgcgatacg
atcatcctcaccgatgaagacccccgcggcgaagaccctgtcgagcttttggagatgatt
gccgccggctgtcctaacaagaagcgcggcgaagaactgtttatcattcccgaccggtcg
gctgccgtccgtaaagcattttcccttgcgcaaccgaatgatgcggtattgttgcttgga
aaggggcacgaaaattcgattatcgggaaaaacggcaccgtaccctatgacgagtatacc
gaagcgcacaatgccctgcgggaattgcaggatttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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