KEGG   Thermus scotoductus: TSC_c24880
Entry
TSC_c24880        CDS       T01414                                 
Name
(GenBank) primosomal protein N
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
tsc  Thermus scotoductus
Pathway
tsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TSC_c24880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsc03400]
    TSC_c24880
Enzymes [BR:tsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TSC_c24880
DNA repair and recombination proteins [BR:tsc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     TSC_c24880
SSDB
Motif
Pfam: PriA_3primeBD PriA_C PriA_CRR zinc-ribbons_6 Auto_anti-p27 Tachykinin TF_Zn_Ribbon Trm112p zf-CHY
Other DBs
NCBI-ProteinID: ADW23084
UniProt: E8PQX5
Position
complement(2328177..2330303)
AA seq 708 aa
MRLLQVALPLPLPPMTYLPPLGQEGVDGEEALGKRIAVPWRGEVRVGVVVGEGGRPSHAL
RHAIAYLDSRPYLRPEEILFLEEAARYLFAPLGQVLADFLPPFPELRHRVRLYPGADPAL
LPRGLEGLVTWQEAKGFDPKLLDYLREAGVLQEEVAFKEGRKVLIPLEKRHPDPLLDAVL
QVLWTLGQAESLAALARAAGVGVGRVKRLLAEGYIGYGTPREPSPAGEPLKPLFLPERPE
RLNGGRLGERMRFLAGLVAKGSHLVLFPEVSLLERFLRHFPQARPYHGGLSREVREALFR
QPGGLIFATYGGLLLPFTPDSLVVVEEGSESYKLPSGTRAFVPPLAELRARLLGVPLTYL
SLVPAVEVLEKPGLAFPVPKPRVLLLDLRKEKGYPLVGRAWALLRQVEEKGRQALVLSPR
LGYSALLLCADCGYKPTCPNCALPLRYHKGGRGELVCHQCGHREPPPVLCPECGSPLLEP
KGPGLEWLQEELRGRLSLPVYRYSKEGKDDLGPLLKGEPGVVVGTTAFLRGPVLPELALV
LLPYADGFLYDSDFRAAERYHRLLWALTELRPGRRPLLVLQTYTPDHPAHQALLEGSVEV
FPWREKALREALDYPPKVRMVKLEVAHRKEERALEEAYGLLSALKGVAREGEVLGPAPAP
VPRVKGMYIFHLLLKGSTERLWELLSRLDRRRFKLDPDPHRFVGLLED
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgcgccttcttcaggtggccttacccctgccccttccccccatgacctacctgcctccc
ctgggccaggagggggtagatggggaagaagccctggggaaacggatagcggtgccctgg
cggggggaggtacgggtgggagtggtggtgggggaagggggcaggccgagccatgccttg
cggcacgccatcgcctatctggactcgaggccctatttgcgcccggaggagatcctgttt
ctggaggaagccgcccgttacctctttgctcccttgggccaggtgcttgccgatttcctg
cccccttttcccgaactaaggcaccgggtgcgcctctacccgggggcggacccagccctt
ctgcccagggggttggagggccttgtcacctggcaggaggctaaggggtttgaccccaag
cttttggattacctgcgggaggctggggtcttgcaggaggaggtggcctttaaggagggg
agaaaggttctcatccccctggagaagcggcatcctgaccctcttctggacgctgttttg
caggtcctttggaccctgggccaggcggagagtttggcagccttggcccgggctgctggg
gtaggggtgggccgggtgaagaggcttctcgctgaggggtatatcggctacgggactccc
agggagccttcccctgcgggcgagcccctaaagcccctcttccttccggaaaggcccgaa
aggctgaacggggggaggcttggggagaggatgcgtttcctggcgggtctggtggccaag
ggaagccacctggtgctctttcccgaggtaagccttttggaacgcttcctccgccacttc
ccccaggcccggccgtaccatgggggcctttcccgggaggtgcgggaggccctttttcgg
cagcctgggggcttgattttcgccacctatggcgggcttctcctccccttcaccccggat
tccctggtggtggtggaagagggaagcgagagctacaagcttccctcggggacccgggcc
tttgtgcctcccttggcggagctcagggcaaggcttttgggcgtgcccctcacctacctt
tccctggtgcccgcggtggaggtcttggaaaagccgggcctggccttccctgtacccaag
ccgagggttctcctgttggacttgaggaaggagaaggggtatcccctggtgggaagggcc
tgggcccttttgaggcaggtggaggagaaggggcggcaggccctggtcctttctccccgc
ttgggctatagcgccctcctcctctgcgccgactgcgggtacaagcccacctgccccaac
tgcgcccttcccttgcgctaccacaaggggggcaggggggaactggtctgccaccagtgc
ggccaccgcgagcctcccccggttctgtgcccggagtgcggttcccccctcctcgagccc
aagggaccagggctggaatggctgcaggaagaactaagggggcgcctttccctacccgtg
taccgctactccaaggaggggaaggacgacctgggccccctgctcaagggagaaccaggg
gtggtggtgggcaccaccgcgtttctccggggcccggtgctccccgagctggccttggtc
ctcctgccctatgccgatggcttcctctacgattccgatttccgcgccgccgagcggtac
catcgcctgctttgggccctcaccgagctgaggccggggagaaggccccttctggtcctc
cagacctacacccccgaccaccctgctcaccaggcgcttttggagggaagcgtggaggtc
tttccctggagggaaaaggccctgcgggaggccctggattaccctccaaaggtgcggatg
gtgaagctggaggttgcccaccgcaaggaggagcgggccctcgaggaggcctatggcctc
ctttccgccctgaagggggtggcccgagaaggggaggtgctgggtccggcccctgccccg
gtgccccgggtgaaggggatgtacatcttccaccttctcctgaagggaagcacggagcgg
ctttgggagcttctttcccgcctggaccgccgtcgctttaagctggatcccgatccccac
cgctttgtggggcttttggaggattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system