KEGG   Candidatus Pseudothioglobus singularis: W908_00820
Entry
W908_00820        CDS       T04071                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
tsn  Candidatus Pseudothioglobus singularis
Pathway
tsn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tsn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    W908_00820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsn03400]
    W908_00820
Enzymes [BR:tsn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     W908_00820
DNA repair and recombination proteins [BR:tsn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     W908_00820
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 AAA_19 HypA DUF678 GP57 PIF1 SWI2_SNF2 AAA_22 AAA_16 TrwB_AAD_bind DUF87 T2SSE
Other DBs
NCBI-ProteinID: ALE01280
UniProt: A0A0M4LE81
Position
complement(167432..169393)
AA seq 653 aa
MQITEVAIPVPLHNTFDYLCKDKVGIGSRVKVPFGNKKVTGIVLSHKDKSSFTKLREVEE
VIDHEVLLSKEILTFLSWSANYYHHPIGEVLSNAIPKNLRNGKPAVIKKPGEVHDKVLSS
GFELTNEQTFAISEVIKNSSEFNGFLLHGVTGSGKTEVYLSITEQLLKKGKQVLVLVPEI
GLTPQMISRFEQRIEGRVVAVHSQLNDTQKQDAYLMAKDGDAKVILGTRSAIFTPIPNLG
LVIVDEEHDNSFKQQSNFRYSARDLSFMRAKFANVPLILGTATPSLETLKNVIEKKLIRL
TLTSRPGEAIMPSVDLIDMRSQPSEPLSKPLIARIKHHLSEGKQVMLFINRRGYAPIYYC
TECDWQSECTSCDSKLVYHRSINRLKCHHCGLEKPPESSCPYCSSHELKILGYGTERLEE
NLESFFPNAEVIRIDRDTTRKKKAFATHLKKINSGEPCIIVGTQMLAKGHDFSNLAFVGI
LDVDVGLMSTDFRATEHLAQLLVQVSGRCGRGKYKGEVNIQTRYPNHPIFNYVKDSRYIE
YAKTLLSERKDTKLPPFAHQALICANAKNKNLAENFLTEVAQLTNSIEIDSVEIWGPVPG
VIERKSDYYYFNLYLQSEDRGQLRRLIQTFYQHVETIKVSSSVRWFVDIDPIE
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcaaatcacagaagttgcaattccggtcccattacacaatacgtttgattacctgtgt
aaagataaagtcggcattggctcaagagtaaaagttccctttggaaataaaaaagtgaca
ggcattgtcctctctcacaaagacaagagcagctttacaaagcttagagaagttgaagaa
gtgatagatcacgaagtactcttatcgaaagagattcttacatttttatcttggtctgct
aactattaccaccacccaattggagaagtgctttccaatgcgattccaaaaaatctaaga
aatggtaagccagctgtcattaaaaagccgggtgaagtgcatgacaaagtcttatcaagc
ggctttgaactgactaatgagcagacctttgctatctctgaggtgatcaagaattcctca
gagtttaatggctttttgcttcatggcgtcactggcagtggcaagacagaggtctacctc
agtatcactgagcagcttttaaaaaaaggaaaacaagttcttgttttagtgccagagatt
ggattaacccctcaaatgatttcccgttttgaacagagaatagaaggtcgagttgttgca
gttcattctcagctcaatgacactcaaaaacaagacgcctatctgatggcaaaggatggc
gatgcaaaagtgattcttggaactcgatctgctatttttacacccatccctaatcttgga
ctagttattgtggatgaggaacacgacaactcctttaagcagcaatctaactttcgctac
tccgcaagagatctaagttttatgagagctaaatttgccaatgttccacttatacttgga
actgcaacaccctcattagaaaccttgaaaaatgttatcgaaaaaaaacttattcgtctt
actctgacctctcgccccggcgaggcaatcatgccaagtgttgatctgattgatatgaga
agtcagccctcagagccattatcaaagccgctcatcgcaagaatcaagcatcacctttca
gaaggcaaacaggtcatgctatttatcaaccgaagaggttatgcgcctatatattactgc
acagagtgcgattggcagtcagaatgtaccagttgtgattctaagctggtataccaccga
agcattaatcgacttaagtgccatcactgtggactagaaaaaccacccgaatcctcttgt
ccatattgcagtagccatgagctcaaaattcttggttatggaacagagaggctagaagaa
aatctagaatcattctttccaaatgcagaggtcattagaattgacagagacaccacgcga
aagaaaaaagcttttgcaactcacttaaaaaaaatcaactcaggagagccctgcatcatt
gtaggaactcaaatgctcgccaagggtcatgacttttctaatctagcatttgttggtatt
ttagatgtcgatgttgggctgatgtcaactgactttcgggcaacagaacatttagctcaa
ctgcttgttcaagtctcaggaagatgtggcagaggaaaatataagggagaggtcaatatc
cagacgcgttatccgaaccatcctatattcaactatgtgaaagattcgcgttacattgag
tatgctaaaaccctcttatcagaacgcaaagatacgaaactgcctccttttgcccatcaa
gcgttgatttgtgcaaatgctaaaaataaaaatttagctgagaattttttgaccgaagtc
gcccaattaacgaatagcattgagattgattcagtcgaaatttggggtccagttcctgga
gtaattgagcgtaaatcagactactactactttaatctttacttgcaatcagaagacagg
ggacaacttagaagactaattcaaaccttttaccagcatgttgaaaccattaaggtgagc
tcatcagttcgatggtttgttgatattgaccctatcgaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (157)   
   KEGG ORTHOLOGY (1)   
   RefGene (154)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (182)   

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