KEGG   Trichinella spiralis: Tsp_01484
Entry
Tsp_01484         CDS       T01609                                 
Name
(RefSeq) DNA polymerase I domain protein
Organism
tsp  Trichinella spiralis
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 HHH_5 NumbF
Other DBs
NCBI-GeneID: 10911460
NCBI-ProteinID: XP_003377292
Position
Unknown
AA seq 1661 aa
MRTLRESILICKSNELKRAYELIANADMLENNSTLSVTAEKSSSWGLIRTLLENKAEILF
FLHCTLSYARQEAVAASEELHKNSDLVESCLQYLQENDFISVTEDNILPTQLGCATVGSS
MSPDEALYVYKDLKKAKSALVLETDLHLVTPIFLIEQVKHGISWTQYYDIWRNLESGQRR
VGEMIGIQERYLVNKAASATLGNVKHNDHEKLQIYLRYFVALALYELVEEKPIMVVSKKY
GFNRGFLQSLQQQAATYAGMVVAFCDRLGWFTFKTLLCGFSERLAFGVKRDLTELVQIDG
IDGLRARRFHEDGITTIAKLAQMKIREIAKVFSRAVPFESSSNGGEKSTWLAGHSELSLY
DAAEFVRKQARCLLSDRLRGFGLCLIQSDEKGSKVLQNNIFVDLLEEDDSHKQWENDDAV
LQFHTSQSASLEGNLKMKNTGDKNACVDKSPEEFPFQSQQNANAISTSIIQEEKFEIEGG
LQVVLERSAYLDEKAESRNWSNGNEMSPFSRSKILGSRNNIEDSASNKLLFPAASDDEQI
LNNDNTCRQSGEKSKCENMNNSLQSALEACNDENPSKTGDNISLVDEVIFDQWFSSPFSL
NDDLMEAFAKNKREDSFSSKDKLSNPENDKQKLSASINYLPSTSYRKTDEKSDLHQEIEL
TEGTVEIFQKNAVAKISSTPTTEIDEIISASWFDSPFLMQENLMTENQPDNTTAHKSNEM
KSESFQHCLAECCGTNVECSYGSSLLEYLEETAGEYGSHCRELSADQFLENSEQQTTDHN
RQLTKTTSVGNENKSDNFYNAQEIDLHQDLEVSLSWFNTSFELIEGSSSRANECLQYSKE
GDPSCRECTIASPETEILDQQTSIQKKMDCLFDEDESSGKNTYSDPLKLSTASEREICNA
LNASFTSLTERPNIDCQLSMKHLSTSEAERHQEFKDALQGLSTQQLVDIFDSSFDTKVDS
TSTESAEIFAESDFRSFTVSKSEQQIQDSSENLPEQTATEYAVVNLEKSKEAMIMFCETI
KKQKQYAISIALDKVTSLKFSGIYALDIENCTACHSKLHSRKSTKISNYTVAVCWDLQNV
YVLTGEFKIVSEFVGDGCEAGEKDKVKLLKMILTPNDSSKVVVFYNLRKVIPLLFELYKN
EAFEFQNRLCLTTASWILNPDGSYWDVKALLTEYSPHDLNILQSSWNNDSSNSSTSCFQS
AATNVLYPKIFEILKKKNLWNAFLNIELPAQYVVGNIESAGIGFNVDLCMAMSTCLKNKL
NELEAEAAKEAGHRFSLNSPKEVSKVLFYELQLPPPDESKVSRRRFTSVKQYSTAKHVLE
NLAQLHPLPGIILEFRQLSAALTNYIYPLLRINRYLCTNCNCVFSTQERIIGKYDWYTAT
GRLIMHEPNLQIVPKFLEIPNGNNTLHIREIFVASEGCTLLSADFSQLELRILAHLSNDS
KLIKILKEKIDVFTEIAAKMNSIDRSAVNEIQRNRAKQICYALIYGMCPKSLAAELGTDE
EQAIQFYNNFKKLFPDVTRWLIETTEKCRSRGFCVTLANRVRYFAAIRSSATSDKLHAER
QAINTTVQGSASDIFKIALRKVYLALDDYTKKNGQMNNAQTLAKIIFQIHDELMLEVTNS
NVEAVATIVKHSMETAVSLRVDLPVRIKHGNSWGTMTYLSV
NT seq 4986 nt   +upstreamnt  +downstreamnt
atgagaacactacgtgaaagtattttgatatgcaaatcaaatgaattgaaaagagcttat
gagctaatagcaaatgccgatatgcttgaaaacaactcaacgctttcagtaactgctgaa
aaatccagcagctggggattgattcgaacacttttagaaaataaagcagaaattttattc
tttttgcattgtaccttatcctatgcaaggcaagaagctgttgctgctagtgaagagcta
cataaaaattctgacttagtggaatcgtgcttgcaatatcttcaagaaaacgatttcatt
tctgttacagaagataatatattgcctacccaacttggatgtgctacagttggttcatct
atgtcgccagatgaagcattgtatgtttacaaagatttaaaaaaagcaaaaagcgcattg
gtattggaaacagacttacatcttgtaacgccgatatttttaattgaacaagttaaacat
ggcatatcttggacgcagtattatgatatttggagaaatcttgaatctggacaaaggcga
gtcggtgagatgataggaattcaggaaagatatcttgtaaacaaagcagcttctgcaaca
cttggaaatgtaaaacataatgatcatgagaagcttcagatttatctgcgatattttgtg
gcacttgctttatatgaattagtagaagagaaaccaattatggttgtatctaaaaagtat
ggattcaatcgtggatttttacaatcactgcaacagcaagcggcaacatacgcaggaatg
gtggtagcattctgtgatcgtttggggtggtttactttcaaaactctactttgtggattt
tctgaaaggttagcttttggtgtgaaacgtgacttaactgagcttgtacaaattgatgga
attgatggactgcgcgctaggcgttttcatgaagatggaattacgaccattgctaaactg
gctcaaatgaaaattcgagaaatagcaaaagtttttagtagagctgtgccttttgaaagc
agttccaatggtggagaaaaaagcacctggttagctgggcattcagagttaagcttgtat
gatgcagcagagtttgttcgtaagcaggctcgctgtttattaagtgatcgtttgcgggga
tttggcttatgccttatacaatctgatgaaaaaggatcaaaagtattgcagaataatata
tttgtcgatttgcttgaagaggatgactcacataagcaatgggaaaacgatgatgcagtg
ttgcaattccatacatctcaatcagcatctttggaagggaatttaaaaatgaaaaacact
ggtgacaaaaacgcttgtgttgataaaagtcctgaagagtttccatttcaaagtcagcag
aatgcaaacgccatatcaacgtctattattcaagaggaaaaattcgaaatagaaggtggt
ttgcaagtagttctggagcgtagcgcttatcttgatgaaaaagcagaaagtagaaactgg
tctaacggtaatgaaatgtcaccattttcaagatctaaaattctgggtagcagaaacaat
attgaagattctgcatcaaacaaattactgtttcctgctgctagtgatgatgaacaaata
ctcaacaatgataatacatgtcgccaaagtggagaaaaatcaaaatgtgaaaacatgaac
aattcattacaaagcgcgttggaagcgtgcaatgatgaaaaccccagcaaaacaggagac
aatatttcactagtagacgaagttatatttgatcaatggttcagctctcctttttcttta
aatgatgatttgatggaagcatttgccaaaaacaaacgtgaagattcattttcatcaaaa
gacaaattgagcaatccagaaaacgacaagcaaaagctgtctgcttctataaattatctt
ccgtctacttcttacaggaaaacagatgaaaagtcagatttgcatcaggaaattgaatta
acagaaggcacagttgaaatttttcagaaaaatgcagttgcaaagatttcttcaactcca
acaactgaaatagatgaaataatttccgcatcttggtttgattcaccttttctaatgcag
gaaaatctgatgacggaaaatcaacctgacaatacaacagctcataaatcaaatgaaatg
aaatctgaatcttttcagcattgtcttgctgaatgttgtggaaccaacgttgaatgttcc
tatggatcatctctgttagaatatttagaagaaaccgctggtgaatatggatctcattgc
cgtgaattatcagctgatcagtttttagaaaatagtgaacaacaaacaactgatcataac
aggcaattaactaaaaccacttctgttggcaatgaaaataaatcagataatttttacaat
gctcaagaaatcgatttacatcaagatcttgaagtatctttgagttggtttaatacctca
tttgaattgattgaaggatcctcgtccagagcaaatgaatgtttgcaatacagtaaagaa
ggtgatccctcttgtagggaatgcacgatagcttcaccagaaactgaaattttggaccaa
caaacttccattcagaaaaaaatggactgtctgtttgacgaagatgagtcgagtggtaaa
aatacatacagtgatccattaaaactttctacagcttcagagcgtgaaatttgcaatgct
ctgaacgctagctttacttcacttactgaaagacctaatattgactgtcaactatcaatg
aaacatttatctacttcagaagctgagcgtcatcaggaatttaaagatgctttacaagga
ttaagtacacagcagctggtggatatttttgattcatcatttgatactaaagtggatagc
acatcaactgaatctgcagaaatatttgctgaaagcgattttagaagctttacagtttca
aaaagcgaacaacaaatccaggattccagtgaaaatctaccagagcaaactgcaactgaa
tatgcagttgttaacttggaaaagtcaaaagaagcaatgatcatgttttgtgagaccatt
aaaaagcaaaaacagtacgctatatcaattgctttggataaagttaccagcctgaaattt
tcaggcatttatgccttagacattgaaaattgcactgcttgtcattctaaacttcattca
agaaagtcaacaaaaatatccaattacacggttgctgtatgttgggatttacaaaatgtg
tatgttcttacaggtgaattcaaaatagtgtctgaatttgtaggtgatggatgtgaagca
ggtgaaaaggataaagttaaattattaaaaatgattttgacaccgaatgatagctcaaaa
gtagttgtattttataatctcagaaaagttatccctttgttatttgaactttataaaaat
gaggcatttgaatttcaaaatcgtttatgcttgaccactgcatcatggatactgaatcca
gatggttcttattgggatgttaaagcgctcctaactgaatattcacctcatgatttaaac
attcttcaatcttcatggaacaatgactcttccaacagtagcactagttgctttcaaagt
gctgcgactaatgtattatatccgaaaatatttgaaatcttgaagaagaagaatctttgg
aatgcatttttgaatattgaacttcctgctcagtatgttgtagggaatatagaatcagct
ggaattggtttcaatgtagatttatgcatggctatgtcaacttgcttaaaaaacaaatta
aacgaactagaagcagaagctgcaaaagaagctggtcatcgtttttcacttaattcacca
aaagaagtttccaaagtattattttatgaacttcagcttccgccaccagatgaaagtaaa
gtatcaaggcggcgttttacatcagttaaacaatattctactgctaagcacgttcttgaa
aacttagcacaacttcatccacttccgggtataattttggaatttcggcagctatctgca
gctttgacaaattacatttatccccttctgaggataaatcggtatttgtgcacaaactgc
aactgtgtattttcaactcaagaacgaataatagggaaatacgattggtatactgctaca
ggtcgtttaattatgcacgaaccaaatcttcagattgtgccaaagtttttggaaatacca
aacggaaacaatactcttcatataagagaaatttttgtggcttctgaaggatgtactttg
ctatcagctgacttttctcagcttgaattgcgaattctggctcatctttcaaatgactca
aagctgatcaaaattctaaaagaaaagattgacgtttttacagaaattgcagccaaaatg
aactccattgatcgttcagcagtaaatgaaatccagcgtaatcgagccaaacagatatgt
tatgcactcatctatggaatgtgcccaaaaagtttagcagcagaactcggaacagatgaa
gaacaagcaattcaattctataataatttcaaaaaactgtttccagacgtaacgagatgg
ctgattgaaacaacggaaaaatgccgaagcagaggattttgtgttactttggctaatcgt
gtccgctactttgcagctattcgaagctctgcaacatctgataaacttcacgctgagcgt
caggctatcaacaccacagtgcaaggttctgcttcagatatttttaaaatagctctcaga
aaagtgtatctagctttggatgattatacaaagaaaaatggccaaatgaataatgcccaa
acgttggcgaaaattatattccaaattcacgatgaacttatgctagaagttaccaattca
aatgttgaagcagttgctacaattgtgaagcattctatggaaacggctgtttcactaaga
gtcgatctaccggtcagaataaaacatggcaatagctggggtaccatgacatatctgtct
gtttaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (58)   

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