KEGG   Trichinella spiralis: Tsp_01876
Entry
Tsp_01876         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K06676  condensin complex subunit 2
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_01876
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    Tsp_01876
SSDB
Motif
Pfam: Cnd2 CNDH2_C
Other DBs
NCBI-GeneID: 10912243
NCBI-ProteinID: XP_003377659
UniProt: E5SDR4
Position
Unknown
AA seq 667 aa
MKRSFKPTTKIASRIVKPTKLTTMYVCPPLASRNCEWKILAEIQNFLKMSAKRQPKMLGK
MNNSVIDLEQQDDFAQIKDFLTSESFSQTTESKSENKENMNSNTISTPRVFEKQEVVTIY
HQCCQLSAHNKITIKNAFSLQLLDVLKEVASDQADNLDFAGAGKALEAGSKIYGCRVDNV
HQQTHQLFNKTNRERLVESTENDESSPVVTKAKKRKARVNVIETDLKNITLTFPHIEAVS
LPRLNLAGEYFDKGIISTAFSQICDTIDDYNAKCLYDIPLEEPELPTKPIPYVEFPDKEI
IGCSVIFPSFEKVTDDVPRSSEKVLELLGHEPDDNDITVANAAMQFTQQLENLTDLHQDV
MNITNDFINEDEDCETTSNLFYEPFHLDNLAAMVSMKELKYSYFDPERLPAEFRKASTVS
GPKKTQHRAAKKRKMEEMELDFDTVLDFDEVINDGCKRIEMSEQTLHNLVCNRVVCMDDF
NFIPEMFMRLWSTGALIKSNLTADYQKAKMLNNMQEEEEEFGSLGNVGYSDDDDDFAENN
VECEISAQGTQAAIQAENSLPSSDICELSLLADWKNSFMPLAACSSSNRKIDVQRIKAIS
MQTLEKNIAENSECKFSEIVSNLRKQEKSPNEEFSVAASFVCLLHLANENNLQLITSQES
DIIVKKN
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgaaaagatcgtttaaaccaacaacaaaaatagccagtagaattgtcaagccaaccaaa
ttaaccaccatgtatgtttgcccgccattggcatcccgaaattgtgagtggaaaatatta
gctgaaatacaaaattttttgaaaatgagtgcaaaacgacagcccaaaatgctcggaaaa
atgaacaatagcgtgatcgatttagaacagcaagatgattttgctcagatcaaagacttt
cttacgtcagaatcgttcagtcaaaccactgagtccaaaagtgaaaacaaagaaaatatg
aattctaacaccatatcaactccaagagtgtttgaaaaacaagaagtagtcactatttat
catcagtgttgtcagctcagtgcccacaataagattacgattaaaaatgcgttcagtttg
caattgttggacgttttaaaagaagttgcttctgatcaagcagataatttggattttgca
ggagctgggaaagctcttgaagctggttcaaaaatttacggctgccgtgttgacaatgtc
catcaacaaacgcaccaattgtttaataaaacgaacagagagcgtcttgtagaaagcaca
gaaaatgatgaatcatctcccgttgtaaccaaggcgaaaaaacgaaaagctcgagttaat
gttattgaaaccgacttgaaaaacatcacgttaacttttcctcatatagaagcagtatcg
cttcctcgactgaatttggctggtgaatattttgacaagggaataattagcaccgctttt
tcacaaatatgtgatacaatagacgattataacgctaaatgtctttacgatattcccctt
gaggaaccagaattacctacgaagcctataccctacgtagaatttcctgacaaagaaata
attggttgcagtgttatctttccaagttttgaaaaagttactgatgacgtaccacgatct
tcagagaaagtactggaattgctgggtcatgaaccggatgataatgacattacggtggcg
aatgcagcgatgcaatttacccagcagttggaaaatctcacggatttgcatcaagatgtg
atgaacataacgaacgattttatcaacgaagatgaggattgtgaaacgacgtccaatttg
ttctacgaaccgtttcatttggataatctggcagcaatggtttcaatgaaagaattgaag
tattcatattttgatccagaacggctgcctgctgaatttcggaaagcgtctacggtttcc
ggtccgaagaaaacacagcatcgagcagcgaagaagaggaaaatggaagaaatggagttg
gattttgacactgttttggattttgacgaagtgatcaatgacggttgcaaacgaatagaa
atgagcgaacaaactttgcacaatctggtttgcaacagagtggtgtgcatggatgacttc
aactttatacctgaaatgtttatgagattatggtcgaccggtgcattgatcaagagtaat
ttaacagcggactatcagaaagctaagatgttgaacaatatgcaagaagaagaagaagaa
ttcggcagtttgggaaatgtcggttacagtgacgatgacgacgattttgccgaaaataat
gtcgaatgtgaaatttctgcccaaggcacccaagctgcaattcaagctgaaaacagttta
ccatcgtctgacatttgtgaattgtccttgttggcggattggaaaaattctttcatgcct
ctggctgcttgttcttctagcaacaggaaaatagatgtgcagcgtataaaagcgatttcg
atgcaaaccctggaaaagaacattgcagaaaattcagaatgcaaatttagcgagatcgtt
tcgaatcttcgaaaacaggaaaaatcgcctaatgaagaattctccgtcgcagcttctttt
gtatgcttgcttcatttggctaatgaaaacaacttgcagctgatcacttcccaagaatct
gatatcattgtcaaaaaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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