KEGG   Trichinella spiralis: Tsp_02927
Entry
Tsp_02927         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K02435  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Organism
tsp  Trichinella spiralis
Pathway
tsp00970  Aminoacyl-tRNA biosynthesis
tsp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Tsp_02927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:tsp03029]
    Tsp_02927
Enzymes [BR:tsp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Tsp_02927
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Tsp_02927
Mitochondrial biogenesis [BR:tsp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Tsp_02927
SSDB
Motif
Pfam: GatC TraI_2_C DUF916
Other DBs
NCBI-GeneID: 10899876
NCBI-ProteinID: XP_003379260
Position
Unknown
AA seq 239 aa
MGFAENQTFLCRAVFYRRIFLFKPRLSSPQQLLDCCPYYSCDKSVVEEISDMRMHQLCRL
FQNTKAVMNLLSYRRTFFHDDGPSQFPLCSDASMFDDVNIEMPSTEEGELSEDLVNLLEK
QSHVRLNDKTAVNNFRNAIKYAQKTKHIDTNNIQPMQALFAGMHLHLRNDDKENFLGCRN
EETLLNASKTSHGYFISPLANMTSENLCISYVFSTVMLITRTVISLTSICLRILFATDF
NT seq 720 nt   +upstreamnt  +downstreamnt
atgggttttgctgaaaaccaaacttttctctgccgggcagtattttatagacgaattttt
ttatttaaaccacgcctttcgtcacctcaacagttgttggattgttgtccatattattct
tgtgacaaatcggtggtggaggaaatttctgatatgcgtatgcatcagctttgcagactt
tttcaaaacacgaaggcagttatgaatttgctatcttatcgtagaacattttttcacgat
gatgggccatcacagtttccgctttgcagcgatgcttcaatgtttgatgacgtgaatatt
gaaatgccttccacggaagagggggagctcagcgaagacttggttaatctgcttgaaaag
cagtctcatgttcgcctgaatgacaaaactgctgtaaataatttcagaaatgcaataaag
tatgcccagaaaacgaagcacatcgatactaataatattcagccaatgcaagcgctattc
gcagggatgcacttacatctgcgaaatgacgacaaggagaattttcttggttgccgcaac
gaggaaacgctgcttaatgccagcaaaacttcacatggatatttcatttcaccactggct
aatatgacatctgaaaacttatgtatttcttacgtgttctcaacggtaatgcttattact
agaactgtaatatcattaacaagcatatgtttgcggatcctctttgctaccgatttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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