KEGG   Trichinella spiralis: Tsp_03712
Entry
Tsp_03712         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K14289  exportin-5
Organism
tsp  Trichinella spiralis
Pathway
tsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Tsp_03712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tsp03016]
    Tsp_03712
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_03712
Transfer RNA biogenesis [BR:tsp03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    Tsp_03712
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     Tsp_03712
SSDB
Motif
Pfam: Xpo1 AAA_24
Other DBs
NCBI-GeneID: 10910195
NCBI-ProteinID: XP_003374516
Position
Unknown
AA seq 1206 aa
MSAILMFQVQIISKLLQILIFLLRISVLQQGICYEQFFGERTETLDLWLTAEIVCLVRMN
ENLPVTGDILPDLISAIECNFQPGTDYNMRSASYMLIESVKESNQCLEIGFRMLDICFSI
YVQQCGLQFILHAIRTKWPSLPPVVQQLSKDRLINCLLSSPANNDIRSTPAIMEGFAQCI
VAIVECDWPQKWKSFIEDCRSISKIGPSQAIVVLSVIGRLIEDVMEFELIEDPSRNKELR
TVVLDSASEFFDLTLEMIKQSKAGEIPPSCAESSVRQRMLEKSYHLLNSLIASLNPRPHL
FTKFVDKILEPARDAFKSGNIPVAEIAISCLESVFPRKASAKNYKPVVIFFKSGRLNFAY
DFIMMTSLLPFDQQNYALLKAATHLFFDIATCFCSFWVGCFELFEIEDCIDNWDSIFRLM
LSLLKHPSTYCRMWCSLIFNSMKNCKKVYKIERFAPILTELFEYIPKATLKNGEPSKAVE
PFSAYAKFDYETNTAFSIDYHRKFCLLFPCAFARSETLVVDSGLREACEVFVGDWVASNW
RRAYSVVMGWLDEILKNPAKASNDECFMTTAKVIHVVFDSLVDVIEDVKKTEYTIIQAKV
DAVMNALQNCQVVNAIQALVSILSSLFPILDVSDPRIPGILCKLISSLTLGIDDPEMAEV
RHHFTYLFIKMATVHQAHLIAHIELIWKEISAVAGQLSDHQKCTVVEGLFALCKLFKNFE
QYAQLMSVTLQQTVEFWASAEIMAAVSKPENFLIYIGLGDPLTNDDSLNLVYHTRRKQFS
FHVKILHSVISRLEVPTEIEVRMSVKFVCLDAKTGGFCITDVQGNLRICHPAAELFQMIF
PTLFTFLRCLKGIYSVSSLKVVHATYDKAKLFDLTDAEKSAVMGKPHETKKFEDMQRQEV
FYEKMKLFLAELSDHLQHLLIRCVFAFDWQFFALPNAASYVEHGIFGDLENLMDYRLRLF
LRRVITPLSNSTTEVQSYFVNGLAKLVEHLNDRLIARWHLIMKKENAYEFDDEQTKQQIF
TENVVSLLTKELALFLRSLLLQQDPEKPRATPKAVELPEFNSSAMDTDANDEQTSSSNAL
SFLGKSLLQRELQSNGILDEESFKHAYAFILGAMPQQCLNPEFVGRLYDLAVQLYEHFRN
IYPNAAQTVLLQTTECSLGDLQKPLKTHQVRQIFGELPPLQRPSPQPPSNDPAFPFDHFA
KFTQAL
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgtccgcgatattgatgtttcaagtgcaaataatttctaaattacttcaaattttaatc
tttttgttacgtatttctgttttgcaacagggcatctgttatgaacaattttttggagaa
cgtactgaaacgcttgatttgtggctaacagctgaaattgtttgcttggtcagaatgaac
gaaaatttgccagtcactggagacattcttccagatttgatttcagcgatagaatgtaac
ttccaaccaggaactgattacaatatgcgctcagcgtcgtatatgttaatcgaatcggtg
aaagaaagcaaccagtgtcttgagattggcttccgaatgcttgacatttgcttctcaatt
tatgtgcagcaatgtggcttgcaatttattttacatgctatcagaaccaaatggcccagt
ttgcctccagttgttcaacaattgtcgaaagatcgtcttattaattgcttgctttcatct
cctgctaataatgacattcgatctacacctgcaattatggaaggttttgctcagtgtatc
gttgcaatagtggaatgtgactggccgcagaaatggaaatcatttattgaagattgccgc
agcatatccaagattggtccgagtcaggcgatagtcgttttatctgttattgggcgcttg
atcgaagatgtaatggaatttgaattaatagaagatccatctcgtaacaaagagttgcgt
actgttgttttggattctgcgagtgaattttttgatttgacattagaaatgattaagcag
agcaaagcaggtgaaatcccaccctcatgtgctgagagttcagtgaggcaacgtatgctt
gaaaaaagttaccatcttctgaacagcctcattgcgtcgttgaatcctcgtccacacctt
tttaccaagtttgttgacaaaattttagaaccagctcgagatgcattcaagtcaggaaac
atacccgttgcagaaattgcaattagttgcttagaaagtgtttttccgagaaaagcaagc
gccaagaattacaagcctgttgttatattttttaaatctggaagactcaactttgcttat
gactttataatgatgacatcgttgttaccgtttgatcagcaaaattatgcattgctgaaa
gctgctacacatttgtttttcgacatagcaacttgcttttgttcattttgggttggctgt
tttgaacttttcgaaattgaagattgtattgataattgggattcaatttttcgcttgatg
ctttctcttttgaaacatccatcaacgtattgtcgaatgtggtgttcgctgattttcaat
tcaatgaaaaattgcaaaaaggtgtacaagatcgaacgctttgctccgatattgacagaa
ttatttgaatatatacccaaagcaacgctcaaaaacggtgaaccgtccaaagctgtcgag
ccgtttagtgcatatgcgaaatttgattatgaaacgaatactgctttttcgattgattat
catcgtaagttttgccttttgtttccttgtgcttttgcaagaagtgaaactttggtcgtt
gattcaggattgcgtgaggcttgcgaagtatttgttggagactgggttgctagcaactgg
cgcagagcatactctgttgtaatgggttggcttgatgaaattttaaaaaatccagctaaa
gcatcaaatgatgaatgcttcatgaccaccgctaaagtaatccacgttgttttcgactct
ctcgttgatgttatcgaagatgtgaagaaaacggagtacacgattatacaggcaaaagtg
gacgcagtgatgaatgccctacaaaattgccaggttgtcaacgcaattcaagcgcttgta
tcgatattgtctagtctgtttccaattttggatgtttctgatcctcgcattccgggcatc
ttatgcaagctaatttcttcactcacattgggcatcgatgatccagaaatggcagaagtt
cgtcaccatttcacgtatttgttcatcaaaatggccactgttcatcaggctcatttaatt
gctcacatcgaattgatttggaaggaaatttcagcagttgcgggacaactttcagatcat
cagaaatgtactgtggttgaaggtttgtttgctttgtgcaaactcttcaaaaattttgaa
cagtatgcgcagctgatgtcagtcacgttgcaacagactgtagagttttgggcatcagct
gaaattatggcagccgtaagcaagccagaaaattttctcatttatattggtttgggggat
cctttgacaaatgacgattcactgaatcttgtctatcacactcgccggaagcagttttca
tttcacgttaaaatattgcattcggttataagtcgactggaagttccgacagaaattgag
gtgcggatgagtgtgaagtttgtttgcttggatgcgaaaacaggcggtttctgcataact
gatgttcagggtaatttgcgaatttgtcatccagctgctgaactatttcaaatgatcttt
cctacgctttttacttttcttcgatgcttgaagggaatttacagtgttagcagtttgaaa
gtagttcatgcaacgtacgacaaggcgaaattgttcgatttaacggatgctgaaaagagt
gcagttatgggcaaacctcatgaaacaaagaaattcgaagatatgcaacgtcaagaagtg
ttttatgaaaaaatgaaattatttttggcagaactttctgatcacttgcaacatttactg
attcgatgcgtatttgcttttgactggcaattttttgcgttgccaaatgcagcgtcctat
gtagagcatggtattttcggggatttggaaaatttaatggattatcgattgcggttattt
ctgagacgagtgatcactccattgagcaactccaccactgaggtgcaaagttatttcgtc
aacggtttggcaaagttggtcgaacatctaaatgaccgtctcatagctcgttggcatcta
attatgaaaaaagagaatgcctacgaatttgacgacgagcaaactaaacagcaaatattc
actgagaacgttgtttcattgctaactaaagagttagcattatttttacgatctttgctt
ctgcagcaggatccagaaaaacccagagctacaccaaaagccgttgaattgcctgaattc
aactcatcggccatggatacggatgctaatgatgagcagacatcaagcagcaatgctctc
agttttcttggcaaatctttacttcaaagagagctacagtcaaatggtattcttgacgaa
gagtcgttcaagcatgcctacgctttcatattgggagctatgccgcagcagtgtttgaat
cctgaatttgtgggaagattgtacgacttggctgttcaactatatgaacattttcgtaat
atttatccgaatgcagctcaaacggtgttgttgcagacgacggagtgttctttaggagat
ttgcaaaaaccattgaaaacccatcaagttcgacagattttcggtgagttaccaccattg
caacgaccttctccgcaaccgccgtctaacgatcctgcattcccctttgaccattttgca
aaatttactcaggctctataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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