KEGG   Trichinella spiralis: Tsp_04345
Entry
Tsp_04345         CDS       T01609                                 
Name
(RefSeq) 40S ribosomal protein S19S
  KO
K02966  small subunit ribosomal protein S19e
Organism
tsp  Trichinella spiralis
Pathway
tsp03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Tsp_04345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tsp03011]
    Tsp_04345
Ribosome [BR:tsp03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    Tsp_04345
  Archaea
    Tsp_04345
SSDB
Motif
Pfam: Ribosomal_S19e HTH_12
Other DBs
NCBI-GeneID: 10905256
NCBI-ProteinID: XP_003375159
Position
Unknown
AA seq 193 aa
MITHIKSYVNVIIKVKEYKWNVLPANCFKIFQNTLLKSVMPISAKDVDQSELVNHLATFL
KKSGKIKLPDWVDLVKLGSFKELAPVDPDWFYTRAASIARHLYIRSPTGVGAFRKVYGGR
KRNGSAPAHFCLASSNVIRKCLQALEEIKWIEKAPNGKGRILTSTGRRDLDRIASQIYAK
THPRRKAASETRH
NT seq 582 nt   +upstreamnt  +downstreamnt
atgattacacatataaagtcttatgtgaatgttattattaaagttaaagagtataaatgg
aatgtgctcccggcgaattgctttaaaatctttcaaaatacattgttgaagtcagtcatg
cctattagtgcaaaagatgtagatcagtctgaactggtgaaccatctggcaacgttttta
aagaaaagtggaaaaatcaaattgccagattgggttgatttggtaaagctcggatctttc
aaagagcttgctcctgttgatcctgactggttttataccagagcagcatccattgcccga
catttgtacattcgctccccaactggtgtgggtgcatttagaaaagtgtatggtggtcgt
aagcgcaacggttcagcgccggcgcatttttgtttagcttcttcgaatgttattcgaaaa
tgcttgcaagcgttagaagaaatcaaatggatcgaaaaggcgccaaatggaaaagggcga
atattgaccagcacgggtcgtcgtgatttggatcgtatcgcctcccaaatttatgcgaaa
actcatccaagacgaaaagcagcttcagagactcgccattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (70)   

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