KEGG   Trichinella spiralis: Tsp_04585
Entry
Tsp_04585         CDS       T01609                                 
Name
(RefSeq) phosphoprotein phosphatase 1
  KO
K06269  serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
tsp  Trichinella spiralis
Pathway
tsp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Tsp_04585
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsp01009]
    Tsp_04585
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsp03021]
    Tsp_04585
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_04585
   03041 Spliceosome [BR:tsp03041]
    Tsp_04585
Enzymes [BR:tsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     Tsp_04585
Protein phosphatases and associated proteins [BR:tsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     Tsp_04585
Transcription machinery [BR:tsp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Tsp_04585
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     Tsp_04585
Spliceosome [BR:tsp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    Tsp_04585
SSDB
Motif
Pfam: Metallophos
Other DBs
NCBI-GeneID: 10912435
NCBI-ProteinID: XP_003369159
Position
Unknown
AA seq 355 aa
METNLENAAKYEQLLIRLREFSAGDTLPMEEPLLTDIFKNVSKILLKEESLLELELPLVI
CGDIHGNFCQLLRIFNRIGWPPKVRYLFLGDYIDRGYRNLEVIALLFTLKILYPEAVFLL
RGNHEASPVNRNYGFKQEVRNRGFSTLFWLTAQITFNCLPLAAVIASKIFCAHGGISPFL
KDFDQIRNFQRPLNVPSDGLIADLLWADPSSDIENFALNEIRNTSVMYGKNAVMQFCKDF
SIDLIIRAHERGNENDKNFPFACNHNGLMKTCISFTSCVDLEVNNVSVVLYYCSYVGMDM
KQQFDKRLAEIVIEMSGNNVVYSQTTYAGGASSADDHNIKRRFEVLIIGEEQKLI
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggaaacaaatttagaaaatgcagcaaaatatgagcaactgttaattcgattacgtgaa
ttcagtgctggtgatactttacccatggaagagccattgctgacagatatttttaaaaat
gtcagcaaaatattgttaaaagaagaatcgctgttagaattagaattgccgttggttatt
tgcggtgatatacatggcaatttttgtcagctgttgagaatttttaacagaataggctgg
ccaccgaaagttcgatatttatttttaggagattacattgatcgtggctatcggaacctt
gaagtgattgctttgctgttcacattaaagattctttatccagaagctgtgttcttatta
cgtggtaatcatgaagcatcgccagtgaatcgaaattatggatttaaacaagaagtgaga
aatcgaggattcagcacgttgttttggttgacggctcagattacatttaactgccttcca
ctggcagctgtgattgcatcgaaaatattttgtgctcatggtggtatttcaccattttta
aaagattttgatcagatacgaaattttcagcgtcccctgaatgtgccatcggatggttta
attgcggatctactttgggctgatccaagtagcgacattgaaaactttgcactaaatgaa
attcgaaatactagcgtaatgtatgggaaaaatgcagtcatgcaattttgtaaggatttt
tcaatagatcttataattcgagctcatgaacggggcaatgagaatgacaagaatttccca
tttgcttgcaaccacaatggtttgatgaagacgtgcatatcatttaccagttgcgttgat
ttggaagtaaacaacgtttctgtggttttgtattactgttcatacgtgggaatggatatg
aaacaacagtttgataaaagactggcagaaattgtgattgaaatgtctggaaacaatgtg
gtatactctcagacaacatacgcagggggcgcgtcttctgcagatgatcataacatcaag
agacgatttgaagtgcttattattggagaagagcaaaaactgatttga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system