KEGG T01609: Tsp

Trichinella spiralis: Tsp_05110

Entry

Tsp_05110         CDS       T01609

Name

(RefSeq) eukaryotic translation initiation factor 3 subunit C

K03252

translation initiation factor 3 subunit C

Organism

tsp Trichinella spiralis

Brite

KEGG Orthology (KO) [BR:tsp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:tsp03012]
    Tsp_05110
Translation factors [BR:tsp03012]
Eukaryotic type
  Initiation factors
   eIF-3
    Tsp_05110

SSDB

Motif

Pfam:

eIF-3c_N PCI GyrB_insert

Other DBs

NCBI-GeneID:

10908607

NCBI-ProteinID:

XP_003369701

Position

Unknown

AA seq 871 aa
MSKFFRGFSDSESESESTEDEVQISSRPSHARPVQSLPFSDSDDDERRVVRPEKDRRFEE
LNELIRQIKNYRKISDMSKLLGGFEDLCKAFHKARALIDREGGGTPRFFLRCLAELEQFV
NEKWEDREGRRQMSKNNARGLTTLRQKLRKYMREFDLELADYKEAPDMADRSSDETAGEL
SSGTDDEADLDKRESASRRVKKTVSKSDAEDEESDWEMSSSSDSELEDLTGKKMEELRRF
FLKSTTRDDDERARKKLERKKRREDKEKPGEAKIDEEEGEWQRSAGSAAAVVEAPKMFEK
ESDINAEAVAKKLQELISVRKRKATDRFAPVDLLKELLKITTSRGLNPALQVKINFAIIT
SYFDCNPKMADALLHNSWLSCMACLQDLTDILMANQDIICGLEVNEDMENLTDPTLPYQI
HACLVSVFERLDDEFTKILQDADCHSTDYVEKLKGEKIVCSYLDTLIQYMRAKLAKKQCP
VEEVCRVYMRKIQHLYYKFDPEALACESGKDSLNTCASSSLAEMKKLCQYLYVNDTTKRL
RTEASLCQVYHLALHDHWYQARDILLMSHLQTHIDHTEISSQILYNRAVCQLGLCAFRNG
LIREALYALSDLQNGGRAKELLAQGSMMRNQDRTPEQEKLERLRRMPYHMHINLELAECV
YLLCAMLLEIPLMASKEFEFRRRTISRSFHYQLKQSERQYIVGPPENTREHVMAASKALL
SGDWKACVDYVFNPKMNAKVWNLFPNSDKVKAMIVARIKLESLKAYIVSFSSVYDSVSLK
RLASMFDLDLKTVHTAISKLIIENNFPASFDEPSECVVISHTEPKRLHTLALQLTDKLNG
LAENVEQLLDPRTGGSRAYGGWIPRYYNACT

NT seq 2616 nt +upstreamnt +downstreamnt
atgtcgaagtttttccgaggcttttcagattcagaaagcgaaagtgaaagcaccgaagat
gaagtgcaaatttcttctcgtccttcacacgctcggcctgtacaatcgttgccattttct
gactcggacgatgacgagcgtcgtgtggttcgaccggaaaaggaccgtcgatttgaggaa
ttgaacgaattgatacgacagatcaaaaattatcgaaaaatcagtgacatgtcgaaattg
ttgggtggttttgaagatttgtgcaaagcttttcacaaagctcgagcactgatcgatcga
gaaggtggtggtactccgagattttttcttcgttgtcttgctgaattggaacagtttgtt
aatgaaaaatgggaagatcgtgaagggcgacggcagatgagtaaaaacaacgcccgaggt
ttgactacgctgagacagaagttgcgcaaatatatgcgtgaattcgatttggaactggcc
gattacaaagaagctccagacatggccgacagatctagcgatgaaacggcaggagaattg
tcttcgggtacagacgatgaagcggatctggataagcgtgaatctgcctctcgtcgcgtg
aagaaaactgtcagcaagagtgatgctgaagacgaagagagcgactgggagatgagctcg
tcgtcggattctgaattggaagatttgactggcaaaaagatggaagagttgcgtcgtttc
tttctcaaatccacaactcgagacgacgatgaacgtgctaggaagaaactcgagagaaaa
aaacgacgcgaagataaagaaaagccaggcgaagcgaaaatagacgaggaagaaggcgaa
tggcaacgaagtgccggtagcgctgctgccgttgtcgaggcgccaaagatgttcgaaaaa
gagagcgacattaatgctgaagctgttgccaaaaagcttcaagagctgatttcggttcga
aagcgtaaagctacggatcgttttgcaccggtagatttgctgaaggaacttttgaaaatc
actacatcacgtggtctgaatccagcgttgcaggtgaaaattaatttcgccattattact
agttattttgattgcaatcccaaaatggccgatgcacttttgcataattcttggctcagt
tgtatggcttgtctccaagatttaactgacattttgatggccaaccaagatatcatttgt
ggcttagaagtgaacgaggatatggaaaatttgaccgatcccacattgccgtatcaaatt
cacgcatgtttagtgtcggtgtttgaacgtttggacgatgaatttacgaaaatattgcaa
gatgccgattgtcacagtactgattatgtggaaaaattgaaaggagaaaagatcgtttgt
tcttatttggatactcttattcagtatatgcgcgcgaaattggccaagaaacaatgtcca
gtggaagaagtgtgtcgcgtttatatgagaaaaatacaacatctgtattacaaatttgat
cctgaagcgttggcttgtgaaagcggcaaagattccttgaatacatgtgcatcgtcgagt
ttggccgaaatgaaaaagctgtgtcaatacttgtacgtgaacgatacgacaaaacgactt
cgaaccgaagcgtctttgtgccaggtgtaccatttggcactgcatgatcattggtatcaa
gcgcgggatattctgctaatgtcccatctgcagactcatattgatcatacggaaatttct
tcgcaaattctgtacaatcgggcagtatgccagttgggcttgtgcgcatttcggaatggc
ttgatacgagaagcgttgtacgcgttgtcggatttgcagaatggtggtcgtgcgaaagag
cttctcgctcaagggtcgatgatgcgcaaccaggatcgcacgccggaacaggagaagttg
gaacgtttgcgtcgtatgccttatcatatgcacatcaatttggaattggcggagtgcgtc
tatttgctgtgcgcgatgttgttggaaattccgcttatggcttcaaaagaatttgaattt
cgtcgacgtacaataagtcgttcgtttcactaccagctcaagcagtcggaacgacagtac
attgtcggaccgccggaaaatacccgcgaacatgtgatggctgcatcgaaagcgctgctc
agtggtgattggaaagcttgtgtggattatgtattcaatccgaaaatgaacgctaaagtt
tggaatttgttcccaaacagtgacaaagtgaaagcgatgattgtcgccagaattaagttg
gaaagtttgaaagcttacattgtatccttttccagtgtttatgattcagtctctttgaaa
cgattagcatcaatgtttgaccttgatttgaaaactgtccatacagcaattagcaaattg
attattgaaaacaactttccagccagttttgatgagccttcagaatgtgtggtgattagt
catacagagccgaaacgattgcacacgttagctttgcagttgaccgataagctgaacggt
ttggctgaaaatgtcgaacagttgttagatccacgtaccggtggttctcgggcgtacgga
ggatggataccacgttattataatgcatgtacttag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

Download RDF

DBGET integrated database retrieval system