KEGG   Trichinella spiralis: Tsp_06183
Entry
Tsp_06183         CDS       T01609                                 
Name
(RefSeq) cohesin subunit SA-1
  KO
K06671  cohesin complex subunit SA-1/2
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_06183
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    Tsp_06183
SSDB
Motif
Pfam: STAG SCD Telomere_reg-2 bMERB_dom
Other DBs
NCBI-GeneID: 10911662
NCBI-ProteinID: XP_003380477
Position
Unknown
AA seq 1158 aa
MSNSSSPSTRPMRLAKQGAYETMSNVLGLSRSHHKVSQSVSGNGSSVSVNPRALDEILDS
NNPSVSAVAQSRSQKRKSPNDSEVVFTTPKRGRPAGRGRGRPPNRPVLDKEASLYFLIKE
GKAALIQVADDWIEHYQKDADLAVMDLIQFFISSTGCKGIVTLNDIRTDDFSQLIRKMTE
DFDEDSGDYPIIIAGLQWKKFRRNFCDFVKTLIKQCQYSVIYDQYLMDIIISLLTGLADS
QVRAFRHTATLAAMKVMTALVEIAVRLSQSLASVSKQFETERTKQRKGNQRIEALMQKKH
EYSENKDEIINMLDYIFKSVFVHRYRDAVPEIRSLCVTELGEWILNFPEHFLDDSHLKYV
GWTLYDKVGEVRLRCLQTLLPLYQEEQFAPRLELFTNKFKTNIFVIQVRLVSMVLDKENE
TAVLAVKLVTCMQRHFPALLVARDNEMVYELIYSVHRGLALAAGEFLLQQLFNVKTPGRT
RSQQECKATNKSVIRDLVQFHKESKLHEHAAYLVDSLYDSHDLLKDWTAMTELLLHGDDK
QPLDREDESLLIDIMACSVKEAATGEPPIARSVNKKYVTQKEHKQVQDDQARLTEHFAEH
LPVLLQKFTANPRDLENLLTIVQRFNIEVYGAAHYLNHLNALVKCLEEIFERHADEELLG
TCSRTYECLCSEKLPVHVRPLVTGSTLIDLTMLKLRQEIQQFNTVDGALDEEDIVTLITS
MRRIEALHQCHDLSKWDVWDLIFPIVKQRQEYAVPPNPEMMRLSVKTCYWSLLWALKAIA
DRQSFEDSIPKLKQQFQQFCTCCRELMESPVNETAETAYLILCDLLLIFGWSLPERNEEL
TALVFEADQSLEDQLEQFVRRKVFVDDAAQAGDVTDEEAEIVKTHRRRIYLAAFCKLVVF
GVVTVASAVHIFKNYVTFQSDFGDIIRVLLNRCRESDKMGWAKTMIRALCALYQETVVRS
ELDPENRDKISDAIYVVHELAKRFAMSFGSDPTKTREAIVTLHREGIDFACAADLNTATG
KAPRDLPFLEALNELSNRLLKQDKRIVLNYLNRHFNGVRVGVDGEWQPLITYRNSLVESE
DEAALMPPPPLPPPLISATVNKGQVPPPLSLTPSMKTILKPDVSSPFVPVAASSFLTRRT
ARTGTTVDTLMEVDFEEE
NT seq 3477 nt   +upstreamnt  +downstreamnt
atgtcaaatagctcttcaccaagtaccagaccaatgcgtctggctaagcagggtgcttat
gagacaatgtcaaacgtattgggcttgtcccgttctcatcacaaagttagtcagtctgtt
tctggaaatggttcttccgtatccgtgaaccctcgagctttggatgagatattggactct
aataatccttcagtttcagcagtggcacaatctagatcacaaaaaagaaaatctccaaat
gattcagaagtggtatttactactccaaaaagaggtcgccccgctggaagagggcgtggt
cggccaccgaatcgaccagttttagataaagaagcttccttgtatttcttgatcaaagaa
gggaaagctgctctgatacaagtagcagatgactggatagagcattatcaaaaagacgcc
gacttagctgtaatggatttaattcaattttttatttcaagtactggttgcaaaggtatc
gttaccttgaatgacattcgtacagatgatttttctcaactcataagaaaaatgacagaa
gactttgatgaagacagtggtgactatccaattataattgctggtttgcagtggaaaaag
tttcgtcgcaatttttgtgattttgttaaaactttgattaagcaatgccagtacagtgtt
atttatgatcaatatcttatggacatcattatttcattattgactggtttggcagattcc
caggttcgggctttccgacatactgctacactcgcagctatgaaagtaatgacagctctg
gtagagattgctgttcggctgagccaatcgttggctagtgtgagtaagcagtttgaaacg
gaacgaacaaagcagcggaaaggcaaccaacgaattgaggcattgatgcagaaaaaacat
gagtattctgagaacaaagacgaaattatcaatatgctagattatattttcaaaagcgta
tttgttcacagatatagggacgccgtgcctgaaattcgctcattgtgtgtgacagagctc
ggcgaatggattctcaattttccagaacactttctggatgattctcacttgaaatatgtg
ggttggactttgtatgataaggttggcgaagtgaggctgaggtgtttgcaaactctgctt
cctctttaccaagaagagcagtttgctcctcgactggaattgtttacaaataaatttaaa
acgaacatatttgtaattcaggttcgtcttgtttctatggtattggataaagaaaatgaa
actgccgtcttggctgtcaagctggttacttgcatgcagaggcatttcccagcattgttg
gtagcaagagataacgagatggtttatgaattgatctattctgtccatcgtggtcttgca
ctggcagctggtgaatttttgcttcaacaattgttcaacgttaaaacccctggccgtact
cgatctcaacaagaatgcaaagcaacgaacaaatctgttattcgcgatttagtgcaattt
cataaagaaagcaagcttcacgaacatgctgcttatttggtcgactctttgtacgacagt
catgatttgcttaaagactggacggcgatgacggaattgctactgcacggagatgataaa
caacctttggacagagaggatgaatccctgctgattgacatcatggcttgtagtgttaaa
gaggcagccactggtgagcctccgatagcgcgcagtgttaataagaagtacgttacacag
aaagagcacaaacaagtccaggatgatcaagctcgactaactgagcattttgctgaacat
ctgccggtacttttgcaaaagtttactgctaatcctcgagatttggaaaatttgttaaca
atagttcaacgttttaatatcgaagtgtatggtgctgcccactacttaaaccatctgaat
gccctagtgaaatgcttggaagagatatttgaaaggcatgccgatgaagaattgcttggt
acatgcagccggacgtacgaatgtctttgcagtgagaaacttccagtacatgttcgaccg
ttggttactggttcaacactgatcgatttgacaatgctgaagctacgtcaagaaattcaa
caattcaacaccgtcgatggagcactggatgaagaagacattgtgacattgattaccagc
atgcgtcgcatcgaggcgttgcatcaatgtcatgatttatccaaatgggatgtctgggat
ttgatctttccaattgtaaaacagcggcaggagtatgctgtacctccaaatcctgaaatg
atgcgcttgtcagtgaaaacatgctattggtcactgctctgggcattgaaagctattgcg
gatagacagagttttgaagattcaataccaaagctgaagcagcagtttcaacaattttgc
acatgttgtcgagagttgatggaatcgcctgttaatgaaacggctgagacggcatatctg
atactttgtgatttgctacttatatttggatggagcttgcctgagcgaaatgaagaactc
accgctttggtattcgaagcggatcaaagtttggaggatcagttggagcagtttgtcagg
cggaaagtgtttgtcgacgatgcggcacaagctggcgacgtgaccgatgaagaggcagaa
attgttaaaacccatcgacgtcgtatttatttggctgcattttgcaagttggtcgtcttt
ggtgttgtcactgtagcgtcggctgtgcatattttcaaaaattatgttacttttcaaagt
gatttcggcgatattattcgtgttctgttgaacagatgtcgagaaagtgacaaaatgggc
tgggcgaagaccatgattagagcactatgtgctttgtatcaagaaacagtcgtacgtagt
gaattggaccctgaaaatagagacaaaatctcagatgcaatttatgttgtgcatgaattg
gctaaacggtttgccatgtcttttggttcagatcctacgaaaactcgcgaagcaatagta
actttgcacagggaaggaattgattttgcttgtgcggctgatttgaatactgctactggg
aaagcgccgcgagatttgccgtttctcgaagcacttaatgaactttctaatagattgctt
aaacaagacaagcggatagtgttgaattatctgaacagacatttcaatggcgtacgggtg
ggtgtggatggcgaatggcagccgttgattacttacagaaactcgctggtcgagagtgaa
gatgaagcggcactgatgccacctccaccgttaccgccgccgttgatcagtgcaactgtg
aataaaggccaagttcctccgccactttcccttactccatcaatgaaaaccattttgaaa
ccagatgttagttcaccgtttgttcctgttgctgcgtcatcatttttgaccagacgtacc
gcgcgcactggaacaacagttgatacgttgatggaagtggactttgaagaagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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