KEGG   Trichinella spiralis: Tsp_06730
Entry
Tsp_06730         CDS       T01609                                 
Name
(RefSeq) tripartite motif protein-containing protein 67
  KO
K10649  tripartite motif-containing protein 9/67
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_06730
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_06730
Membrane trafficking [BR:tsp04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    Tsp_06730
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    Tsp_06730
SSDB
Motif
Pfam: SPRY Patched Sterol-sensing EB MMPL fn3 zf-RING_UBOX zf-B_box Mce4_CUP1
Other DBs
NCBI-GeneID: 10911838
NCBI-ProteinID: XP_003380572
Position
Unknown
AA seq 2249 aa
MEEELRCPVCKVFFVNPVLLPCSHSLCLSCALSVQTSTRTNRVEQSNSILTTVHHNIHGQ
SSTVCLSSPDSGSISSGDAASVFAASEPDSVFEECDRSSLASSETTDSGVMLCINSRPSS
LLGGYTLICPACQKNSWLGDEGAQALPRNRALSNVVLRYCSRTTVADLRAPPPPVGGFTC
QLCEQQPSKLATVRCEQCSISYCQQCLRDCHPARGPLAKHQLTPLTTAVSKILPTATSTT
ADIRCSEHSTQSVSLYCMSCKIALCTACVKHPEEDPRHAGHDLQPLATVCKIQKTELSQT
LQSLSEKAKTATENLARLKQLNDKVQTNSVDFEALIVTQCDKLIVAIEQRKQELLDLALR
EKETKNQLFRDQISNCTNQLQKTTGLVQFCIEALKEVDPIAFIQISPALIHRVSNMELIW
RKELEADIANVSPEFELTLDVQPVTAAINQLNFVQLKIPECPTIITEACSAQNNSVTIVW
KAPLNSYIEGYILEIDDGHGDGNFKEVYVGADTACNVDNLHFNSVYLARVKAYNMIGEGS
YSQCIRLHTAGFIRIKKSVINDVLVLAAWFQFKPNGSNCEAVFDQENTTLSSTSLNYSVV
LGTVCFTRGRHYWEVSVDRRDASADVIVGIATSKVSRNMMLGKDEHGWSMYIDEERSWYL
HAEMHHGRVDGGASVGSVIGILLDCDAQTLDFYVDGRKQTSELAFRRKQQLSQYLLKRKR
NGNAPTDGWWMDVHVKRTGLRSLWLSLHEPKRQLAAFFLRQRPTVLLALTNQEKERQCTM
DTGVAAGRYAMFICNRPITVFMTTTFLLCTLTALGLELAPTPDFSDPKVGFETRGTVLSD
RVLTWNNLEEKISFYPDSRKEFYRQMPPINILQRRKRNGTGQLLEELFFAALTSSPCLQL
HAPLAQLEYHSLIVLEAPSTKSLFTVDVILELCKLQQQINATLQEVKIRLEQNHFWSLPN
YITCFSGELTCTNLKEKDVGTVAANIERCAPYQQQIIHCKGSANTAACQAIPDYCNSKYY
QDLFYFILSQNIFSNATGPVYTSMVLPIYSYNTYEYLGRRDVSLKKFAKLYEKVSEWQND
LKHLKLVGLNLGIKLQMFNSLLVNDTVWVFLGISLVAVIIWIYSGSFFYAVTVLLSMFFS
VTVAYFVYGLVFRMEFFPFMNLLVIVLLIGIGADDTFVLKYVFDTSKKQGAKTIAPEDIV
DALSYAALSMLITSVTTAAAFFSSLTSNVIVIKCFAVFAGTTMLMNYLLVVSFMPASLII
LERYVNPLYERWCPKPLNALVVQAYASGTIASNFLMQICLPFVLQRLRAYVIAAFGLLLA
LSFFLVFYKPGLSLPKRNPILLFQPSHPFEWYDDQMELHFRFALARYCMPIKVSLVWGFV
PSEVGGSHFDPFSYGQLAQDTRFKANLETLRDLQAVCDRLAKEPAFNYDGDCFAHAFFKW
SKQQVCVGEGESCCAYLSKYFDQRNVQPCVAAFTRTTDVFSGSPIIRYDNDAVVGFVIYL
ETRHNWTTDYDKLKHFQDDIESTVRRVLGESRTATLKRGWPVTTDSMTTSWYDLQKELLL
GTPTSIILSILIAFIVAVCVTRTVVLSFLSILSISAVILDTIAVLVLLGWRLNVVESTII
ILTIGLSFDYTLHYAVAYKFASLGSRDDKVMTVLKYIGVPVTLSALTTLLAGLAMLPSNV
MAYTQIGFFMILMSLISWLNSSLCYLSLLAVWGPQSTSLYKFLKRFAKSKAKRCCITIKQ
KELHSNKCCHAMLMMLFLKRAKQRNCGLKNNKVQLSNSEVYISTSDEDNQKNSTDKYSPA
QNNSTWTEIFIIDMDEKFSYLGMTCQNNSTCASIPNSYCTDKFTCQCRPNFLPRSNSACI
LAPTYGQICSPELSTFACRPPFVCNSNSLCDCPQSHEVFAYGCLKRKQLNESCEVKGQCL
CNYCNCKEGTCQCIEGAESKHNLCTYSGNSCLIGQPAVDENFQLLRCSPTDDCPEHYICT
ATNETGICCPAINCPVGEALLNYSCHNCPSETHFCHVTTFGVNDMSLCCPKARMFGQSCE
HTMQCSTWDAICEIDADHVKKCLCKEKKYNSNINACVREAQLGDSCNITEECVENANIIC
LDGRCQCYPGYIAQPVRQNKSEASSCCILKPVCPTKNGFQYLDHFVFCEFDDNQCSTNEY
CRINEMRPNETISVCCPKPITPIIKHWKILKHCAPTGACICTTKTKKKKKYFTVRCSIST
TLSSGGKKTSTPHAHQVHTAFGIIIIQVT
NT seq 6750 nt   +upstreamnt  +downstreamnt
atggaagaagaactacggtgccctgtgtgcaaggtgtttttcgtgaatccggtactgctc
ccttgcagtcattcgttgtgtctgagctgtgcgttgagtgtgcagacgtcgacgagaacc
aaccgtgtggagcagtcgaattcaatactgaccactgttcaccacaacatccatggtcag
tcttcaacagtgtgcttgtccagtccggacagcggctcgatcagcagtggagatgcggct
agtgtgtttgcggccagcgaaccggacagcgtgttcgaagagtgcgaccgaagctcactg
gcttcatccgaaaccaccgactctggtgtaatgttgtgcatcaacagtcgaccgagcagt
ctactgggcggctacacactgatttgtccggcttgtcagaagaacagctggttgggcgac
gagggtgcccaagccttgcccagaaaccgcgccctctccaacgttgtactgcgttattgt
tcccgtacgacggtcgctgatctccgcgcaccgccaccaccagtcggtggtttcacttgc
cagctttgcgaacagcaaccgtcgaaattagccaccgtccgttgtgaacagtgttcaatt
tcctactgtcagcagtgcttacgtgactgtcatccggccaggggcccactggcgaagcat
cagcttaccccgttgacgacggccgtttcgaaaattttacccacggctacgagcacaaca
gccgatatccgatgttctgaacacagcacacagtcggtatcgctttactgcatgtcgtgc
aaaattgcattatgcactgcctgcgtgaagcatccagaagaagatccacgtcacgccggt
cacgatctccaacctctcgccaccgtctgcaaaattcagaagacagaactgtcgcaaact
ttgcaatcgttgtctgaaaaggcaaaaacagctacggaaaatttggctcgtttgaagcaa
ctcaacgacaaggtgcagaccaactcggtggatttcgaggctctcatagtcactcaatgc
gacaagttaatcgtggccatcgaacaacgcaaacaagaattgttggatttggcgttgcga
gagaaagagaccaagaatcagctgtttcgtgatcaaatctctaattgtaccaatcaattg
caaaagacgactggtttggtgcaattttgcattgaagctttgaaagaggttgatccaatt
gcttttattcagatttcaccagcgctgatccatcgcgtatccaacatggaattgatttgg
cgcaaggaactcgaagctgacatagcgaatgtgtcaccagaatttgaattaactttagac
gtacagccagtcacagctgccatcaatcaactcaactttgtccaactgaaaattccggaa
tgtccaacaataattactgaagcttgcagtgctcaaaataattccgtcacaattgtgtgg
aaagcaccgctgaattcctatatagaagggtacattttggaaattgacgacggtcacggt
gatggaaatttcaaggaagtttacgttggtgcggacacagcatgcaatgttgacaatttg
catttcaactcagtctacctcgctcgagttaaagcatacaatatgatcggcgaaggcagc
tattcccagtgcatacggttgcatactgctggctttattaggattaaaaaaagtgtgata
aatgatgttcttgttttagctgcgtggtttcaattcaagccaaacggctcaaattgcgaa
gcagtatttgaccaagaaaatactaccttaagcagtacttcattgaactacagtgttgta
cttggaacagtctgtttcactcgcggtcgtcactactgggaagtgtctgtagacagacgg
gatgccagtgctgatgttattgtaggaatagctacttcaaaagtttccagaaacatgatg
ttagggaaagatgaacacggttggtccatgtacattgacgaagagcgttcttggtatttg
catgccgagatgcatcacggtcgagtagatggcggtgcatctgtcgggtccgttattgga
atattgctagattgtgatgcgcagacgttggatttttacgttgatggccgtaagcaaact
tccgaactggcattccgtagaaaacaacagttgtcgcagtacttattaaaaagaaagagg
aatggaaatgcgcccacagatggatggtggatggatgtgcatgtgaagagaacaggattg
cgttcactttggctgagtttgcatgagccaaagcgacagttggctgctttttttctgcgc
cagcggcctacagtgctactagcgctgacaaaccaggaaaaggaacgacagtgcacaatg
gacaccggggtagcagcaggtcgatatgccatgtttatctgcaatcgaccaatcactgta
tttatgacgacaacatttttgctttgtactttgacggctttgggacttgagttggctccg
actcctgacttttcagaccctaaagttggctttgaaacacgtggcacggtactaagcgat
cgagtgctaacgtggaacaatcttgaggagaaaatttccttctatccagattcaagaaaa
gagttttaccgtcaaatgccgccaatcaacattttgcaaagacgcaaacgaaatggtacc
ggtcagcttttggaagaattatttttcgccgctcttacctctagcccttgtttgcaatta
cacgcgccacttgctcaactggaatatcacagcttgatagttttggaagcaccttcgacg
aaatcactgtttacagttgatgtgattttggaactgtgcaaattgcagcaacaaatcaat
gccactttgcaggaggtgaaaattcgcttggagcagaatcacttttggagtcttccgaat
tatatcacatgtttcagtggtgaactcacttgtacaaatttgaaagagaaagatgttggt
acggtggcggctaacattgaacgttgtgcaccttatcaacagcaaatcatccactgcaaa
ggtagtgcaaatacagccgcctgtcaagctataccggattattgcaattcgaaatattat
caagatttattttatttcattttatcgcaaaatatcttttcaaacgcaaccggaccagtt
tacacgtcgatggttttgccaatatattcgtacaacacgtatgaatatttgggaaggaga
gatgtgagcttgaaaaagtttgcaaagctttatgaaaaagtatccgaatggcaaaacgat
ttgaaacatttgaaattggtaggcctgaatttgggcatcaaattgcaaatgttcaactcg
ttgcttgtgaacgacaccgtttgggtattccttggcatcagcttggtcgctgtgataatt
tggatttattcgggctcatttttctacgccgtcacagtgttgctgtcgatgtttttttcc
gttactgtggcttactttgtctacgggcttgtatttcggatggaatttttcccattcatg
aatttgctggtaattgtgttgctgatcggcatcggtgccgacgatacgtttgtgctcaag
tacgtcttcgacacgtccaaaaagcagggggcgaaaacaattgcgcccgaagatattgtc
gacgcgttgtcctacgccgcactgtccatgctaattaccagtgtgaccacagcggcggcg
tttttttccagcctcaccagcaacgttattgtgatcaaatgtttcgccgtatttgccggc
acgacaatgctgatgaactatttgctggtcgtgtcgttcatgccggcatcgttgatcatt
ctcgaacgttacgtcaatccgctctatgaacgttggtgtccgaaacccctgaacgcgttg
gttgttcaagcgtacgcttctggaacaattgcgtccaatttcctcatgcaaatctgcttg
ccgttcgttttgcaacgcctgcgggcttatgtgatcgcggcgttcggtctgctgctcgct
ttgtcatttttcctggtcttctacaagcctggtctgtcgttgccgaaacgcaatccaatt
ttgctcttccagccgtcccatccgttcgaatggtacgacgaccagatggaattgcacttt
cgcttcgccctggccagatattgcatgccgatcaaagtgtccctggtttggggttttgtg
ccgagcgaagtcggcggctcccatttcgatccattttcctacggtcaattggctcaggat
acgcgcttcaaagccaacttggaaacgttgcgcgatttgcaggcggtctgcgatcgtctg
gccaaagagccggccttcaattacgacggcgactgttttgcccatgcttttttcaaatgg
tccaaacagcaagtctgcgttggagagggggaaagttgttgcgcctatttgagcaaatat
ttcgaccagcgcaacgtgcagccgtgcgtagccgctttcacccgcaccacggacgtgttc
agtggcagcccaataatccgctacgacaacgacgcggtggtcggctttgtcatctacttg
gaaacccggcacaactggaccaccgactacgacaagctgaagcatttccaagacgacatc
gaatcgaccgtacgtcgagtgttgggcgagtcgagaacggccacactgaaacgcggctgg
ccagtgaccaccgattcgatgaccacttcttggtatgatttgcaaaaagagttgctgctc
ggcacgccgacgtcgatcattctcagcatcctgatcgcgttcatcgtcgccgtctgcgtc
acgcgtactgtagttttgagctttctcagcattttgtccatttcggcggtgattttggac
accatcgccgtgctggtgttgctcggctggcgactgaacgtcgtcgaatccacgatcatc
atcctcacaattggcctctcgttcgactacaccctccactatgcggtcgcttacaaattc
gcctcactcggcagccgcgacgacaaagtgatgacagtgctcaaatatatcggtgtgccg
gtgacgttgtcggcgttgaccacccttttggccggcttggccatgcttccgtcgaacgtg
atggcctacacgcagatcggctttttcatgattctgatgagcttgatcagttggctcaac
tctagtctgtgctatttgtctctgctcgctgtctggggtccgcagagcaccagtttgtac
aagtttttgaaacgttttgcaaagagcaaagcgaaaagatgttgcattacgataaaacaa
aaagagttgcattcaaataaatgttgtcatgcgatgttgatgatgctatttttgaaaaga
gcaaaacagcgaaactgcggactgaaaaataacaaggtacaactttccaattcagaggtg
tatatctctacctctgatgaggataatcaaaaaaattcgactgataaatattcaccggca
caaaacaacagcacatggacagaaatttttatcattgatatggacgaaaagttctcctat
ttgggaatgacttgccagaacaactcgacctgtgcaagcattccaaactcatattgtaca
gataaatttacttgtcagtgtcgaccaaattttttaccacgttccaacagcgcttgtata
ctagctccaacatatggtcaaatttgttctcccgaactgtcaacatttgcatgccgtcca
ccatttgtatgcaattcaaacagcctttgcgactgccctcagtcgcatgaggtctttgca
tatggttgcttgaaacgaaagcagctaaatgagagttgcgaagtaaaaggccagtgtttg
tgcaactattgcaattgcaaagagggcacttgtcagtgtatcgaaggtgcggaatcgaag
cacaatctttgcacatacagcggaaattcatgtctaattggccaacctgcagtggatgaa
aattttcaacttctgcgttgcagtccaactgatgattgtccagagcattacatttgtact
gctacaaatgaaacgggcatatgttgtccagcaatcaactgtccagtaggagaagcgctt
ttgaattacagctgccataactgcccttctgaaacgcatttctgtcacgtcactacattt
ggagtcaatgatatgtcattgtgttgcccgaaagctagaatgtttggacaaagctgtgaa
cacacaatgcaatgttcaacttgggatgcaatttgtgaaatcgatgctgatcatgttaaa
aagtgcctttgcaaggaaaagaaatacaatagtaacatcaacgcatgtgttcgtgaagca
caactaggtgattcgtgtaatataacagaagaatgtgtggaaaatgcaaatattatctgt
ttggacggaagatgtcagtgttatcctggctatattgcgcagcctgttcgacaaaacaaa
tccgaagcttcaagttgttgtattttaaaaccagtatgcccaacaaagaacggttttcaa
tatttggatcactttgttttttgtgaatttgacgacaatcagtgctctaccaacgaatat
tgccgaataaatgaaatgagaccaaacgaaacaatttctgtgtgttgtccaaagccaatc
actccaatcattaagcattggaagattttgaagcactgtgcgcctactggcgcatgcatt
tgtactacgaaaacgaagaagaaaaagaaatatttcactgtacgttgcagcatttcgacg
acactgtcctccggaggcaaaaaaacgtctacgcctcatgcccaccaggttcacactgca
tttggaattattataattcaagtaacctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (137)   
   KEGG ORTHOLOGY (1)   
   RefGene (133)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (152)   

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