KEGG   Trichinella spiralis: Tsp_07008
Entry
Tsp_07008         CDS       T01609                                 
Name
(RefSeq) UbiD family decarboxylase
  KO
K14317  nuclear pore complex protein Nup214
Organism
tsp  Trichinella spiralis
Pathway
tsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Tsp_07008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_07008
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Tsp_07008
SSDB
Motif
Pfam: DUF445
Other DBs
NCBI-GeneID: 10903300
NCBI-ProteinID: XP_003380862
Position
Unknown
AA seq 1380 aa
MLSLHPGLSTSFSQFAVILPVHARSCLGISLDCLSKTVLLLPARGTISNVRKSFNNDNQI
SSLKKMRSTIVRAKRTVWAKLFPEIDDVEQKINFNVMTISQKYGILFVALGNVVKMFPTS
FVHGIVENFEYRMSETYAILESTSISVQNCVTCIQCNCAGNRLAVCVDDGGTPAAFIYEI
ENINSTSKHIARIQISCGHSTGLKDFRWNPNLTECFSVVLNDGTLSVMKTKNNKFRLVGK
TTTTDILCCMFFVCLTAWEPLGKRLVAGLSNGKFSIYSVTLNQCSTFDPPPNLPASKFSV
IDAIWHNNSEVLLVYAAEDDRKQTFLVQATVSNHKPPSISYGPLIDIQPQIFIDSFPNCS
RLAFIVVVFRNVLLYSSTVGCEVVVLIRDVDSQNWTRCVETESDDDYLVFPTNLYKGDFS
AVGMVFDLTNEKPTKTGEGDTFPPFPYIHVFSSEAGLISWRIELLNKRDVPFCRGVAAPQ
GCKLATPTLVKQSDVIVDGQIRDDNKQLSSSNTVHGHNLSLNLNAAAVNSVSSVLDLRDK
SSEHISGVKSLSYIKQRTDEKLSTVSKLQIPGNDPLESPDAAVVLNSDDVNSLVINILSK
KLTISRKHFCEPIQSKISDNLLSVLQSEVEFFQTKWNGEKERLQHLEQWCSNLRLMSVNM
QAYLETMVMYLEQERDGNRYCSMQAYPLAPEQEQRMLNLHVMHDRLQAAVDDICQQVADI
RQNLNRYEDMNDPQAWSMICKSFSNIHKASELRFKRLRQLKDQLENLPFQEHCSLNTSIC
SKIEEWKNENSFSRIVYPPRLFETDVENKQPSVKRDAQRRLKQYVQQFKEPRIIQVDPFL
FECSSKGTNDETASLFRQTFSMPQSSSVLPKEKMLFTKPTVRSPVVLKVEDAHPTVEKRQ
NVTTVQLSNKADLTSIGKQVVGKMPSTPSSTKDENVNFKPEVSKFVTALKHEEPPLLTAE
IAPTISVGKSLFETETKSEFKPAEFKFVLPTPVQTSVEETEISETLSTVSFAGAKVSQSC
EIEDKPSVKNDAILTAKLSADKANDKDEKKVVNGAAVENEMPNKTVEQAAVEQQQSADET
VVDSNNSQPSAVLVDEKNEDVEKLVEEVPAVAKEENTVDMDSEVAAPPVNQEPSVGSDFS
FCGLGGKPTPEAAARNVFAGNTSFGTAVVSKPSSTVAQPSSLGLFGSATTFTAPSGPSLF
GGQATVCDPGPFSGGSGSESIAQKGFAVFSTSVSTASVSPSAPAFGSTGASAFGGPPTFG
SAPTFGGSPSFGGAPTFGASSSPSFGSPPAFGSTSPPKFGQGQGLFGSLTSFNQISQPAT
GFSTYIFANANSVSFGALASTFGGASQTNPVSNTALQQQQQPQQQQQQQQSSFTQWREKT
NT seq 4143 nt   +upstreamnt  +downstreamnt
atgctgtcactacatccgggtctctccacatcgttctctcagtttgctgtaatcttgcca
gtgcatgctcgaagttgtctgggaatatctttagattgtttatccaagacggttcttcta
ttgccggctcgtggcaccataagtaatgtaagaaaaagtttcaataatgataatcagatt
tcgtctctgaagaaaatgagatccacaattgtgagagccaaacgcaccgtttgggcaaag
ttgtttccagagattgatgatgttgaacagaaaatcaacttcaatgtgatgaccatttcg
cagaaatatggaattttgtttgttgctttaggaaacgttgtgaaaatgtttccaacttcg
tttgttcatggcattgtcgaaaattttgaatacagaatgagtgaaacttatgcaatattg
gaatccacttcaatatctgtgcagaactgtgttacttgcatacaatgcaactgcgcgggt
aatcgtttagcagtttgtgttgacgatggtggcacaccggcagctttcatctatgaaatt
gaaaatataaattcaacttctaaacacattgcacgaattcaaatttcttgtggccattct
accggattgaaagatttccgttggaatcccaaccttaccgaatgtttttcagtcgtttta
aacgatgggacgctttctgtgatgaagactaaaaataataagtttcgtctagttggaaaa
acaactacaacggatattttgtgctgtatgttttttgtttgtttaacggcttgggaaccg
ttgggcaagcggttagttgctggtttgtcgaatggtaaattttccatttattccgttacg
ctcaaccagtgttccactttcgatcctccacctaatctaccggcatctaaattttcagtg
attgatgctatatggcataataattcagaagttttacttgtctacgctgcggaagacgac
cgtaagcaaacatttttagtccaggcaaccgtttccaatcataagccgccgtcaataagt
tatggtccacttatcgatatccagccacaaatatttattgacagctttcctaattgttca
cgtctagcattcattgttgttgtatttaggaatgttttgctttattcgtcaacagttggc
tgtgaagttgtggtgttgattcgtgatgttgactcccaaaattggactagatgtgttgag
acagaatctgatgatgattatttagtatttccaactaacttgtataagggagatttttca
gcagttggtatggtgttcgatctcactaatgagaagccaactaaaacgggtgaaggtgac
acttttccgccgttcccgtatattcatgtattttcaagtgaagctggtttgatttcatgg
agaattgaactcttgaataagagagatgtgccattttgtcgaggagttgctgcaccacag
ggatgtaaattggctacaccaacattagtgaaacagtctgatgtgatcgtagatggacag
ataagagatgataataagcagttatcatcttcaaatactgtgcatgggcacaatttatcc
ctgaacctgaatgcagccgcggttaatagtgtttcatctgttctggatctaagggacaaa
tcatcagaacatattagtggtgtgaaaagtttgtcctacattaaacaacgcactgatgag
aaactttcgacggtatcgaagttgcagattcctggtaacgatcctctggaatctccggat
gcagcagtagttttaaattcagacgatgtgaattctttggtaattaacatcttgtcaaaa
aagctgacaatttccagaaagcatttttgtgaaccaatccaaagtaaaattagtgacaat
ctgttgtcagttctgcaatctgaagtggaattctttcaaacgaagtggaatggcgaaaag
gaacgcctccaacaccttgaacagtggtgttctaatttacgtctcatgtcggtaaatatg
caggcgtatttagaaactatggtgatgtatttggagcaagaacgtgacggaaaccgttac
tgcagtatgcaggcatatccgttggcaccggaacaagagcagcgaatgttgaatttgcac
gtaatgcacgatcgtctgcaagctgctgtggatgacatttgccaacaggtggcagatatc
cgacaaaacttgaatcgttatgaagatatgaatgatcctcaagcatggtcgatgatttgt
aaaagtttcagcaacatccacaaagcatctgaattacgctttaagaggttgcgacaattg
aaagatcagttggaaaatttgccgtttcaggaacattgttctttgaatacttccatttgt
tcaaagattgaagaatggaaaaatgaaaattctttttcacgtatcgtatatcctcctcgg
ttgtttgagactgatgtagagaataagcaaccgtccgtgaaacgtgacgctcagcgacgt
ctcaagcagtatgtacaacagtttaaagagccacgcataattcaagttgatccatttcta
tttgaatgctcatcaaagggcactaatgatgaaacggcatctttgtttcgacaaacattt
tctatgccacaaagcagttcagttttaccaaaagaaaaaatgcttttcacaaaaccgact
gttcgttctcctgtggttttaaaagttgaagatgcacatccaactgtggaaaaacggcaa
aatgttacaacagtgcagttgtccaacaaagcagatttgacttccatcggcaagcaggtt
gttggaaaaatgccttcaactccaagcagtacgaaggacgaaaatgtaaatttcaagcca
gaggtgtcgaaatttgtaactgcactaaaacatgaagaaccaccgctactgacggcagaa
attgcccctacaatttcggttggaaagtcgctttttgaaaccgagacaaaaagtgaattt
aagccagcagagttcaagtttgtgcttcctacacctgtccaaacttctgtcgaagaaact
gaaatcagtgaaacgttatctactgtttcgtttgccggtgcaaaagtttctcaatcatgt
gaaattgaagacaaaccgtctgtaaagaatgatgcgatattgacagctaaactttcagct
gacaaagctaatgacaaggatgagaagaaagtggtgaacggtgctgcagttgaaaatgaa
atgcccaacaaaactgtggagcaagcagcagttgagcagcagcaatctgcagacgaaact
gttgtggatagtaataattcacagccgtcagcggtgcttgtggatgagaagaatgaggat
gtggaaaaattggttgaagaagtaccagcagttgcgaaagaagagaatacagtggatatg
gactcggaggtagctgcgcctccggtaaatcaagagccatcggtcgggtctgatttttct
ttctgcggtttgggtggcaaaccaacgcccgaagctgcagccaggaatgtgttcgctgga
aatacttctttcggtactgccgtggtgagcaaaccgtcttccactgttgctcagccgtca
tctttgggcttgttcggttcagctacgacttttactgctccatccggacccagcctcttc
ggaggtcaggctacggtttgtgatcccggacctttcagcggcggcagcggtagtgaatca
atagctcagaaaggctttgcggtcttttctacgtcagtttcgaccgcgtcagtctcgccg
tcagctccagctttcggttcaacgggggcttctgcgtttggcggaccaccgacttttggt
tcagctcccacttttggcggcagcccgtcattcggcggcgctccaacattcggcgcctcg
tcgtcgcccagtttcggttccccgccggcttttggtagcacttctccaccaaagtttggt
cagggtcaaggtttgttcggctctttgacgtcgtttaatcagatcagtcagccagctact
ggattctcaacgtacatatttgccaatgcgaattcagttagtttcggtgctttggcgagc
acttttggcggtgcaagtcaaaccaatccagtcagtaacactgcgctacagcagcaacaa
cagccacaacaacaacaacaacagcagcagtctagctttactcagtggcgagaaaaaaca
tga

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