KEGG   Trichinella spiralis: Tsp_07515
Entry
Tsp_07515         CDS       T01609                                 
Name
(RefSeq) fizzy-related protein
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
tsp  Trichinella spiralis
Pathway
tsp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Tsp_07515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_07515
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Target recognizing subunit
     Tsp_07515
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Ge1_WD40 eIF2A
Other DBs
NCBI-GeneID: 10901965
NCBI-ProteinID: XP_003381812
UniProt: E5RZC2
Position
Unknown
AA seq 477 aa
MSGNDYGKRFLRLHNAGVSRPTSTKRSLFRDSKTPPNEGDRFIPLHEPSIWQSGVHHCNL
GRTCQQDPTISDLNEDVDVYRALVSNELFDTAIDDLQDLSPNTKVRRLFEYSKQTTSPSN
MRRAAAESTCPLTISPLSPLSQRLLVRPRRSERKIYRTPYKILDAPELQDDFYLNLVDWS
KENVLAVGLGSSVYLWCARNGQVTKLCDMVPHTDIVTAVSWAADGRTLAVGTQRGSCQIW
DANAQLDRQNFFGHLSRIGCLAWNGDTVTSGSRDRQIVVRDLRASGAHQERRLLGHRQEV
CGLKWSPDYEYMASGGNDNQLMIWTLASDKPIQVNRQHCAAVKAIAWSPHHPGLLVSGGG
TADRCLKFWNTLTGQPVRSVDTGSQVCNVLWSRHSDELVSTHGYSQNQILVWKYPTLDRL
VKLVGHSSRVLYLSMSPDGESIVTGAGDETLRFWRVFEKDSQTRGHLSPLATHSAMR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtccggtaatgattatggaaaacgctttcttcgacttcacaacgctggggtttctcgt
ccaacctctacgaaaaggtcgttgttccgtgattcgaaaacaccgccaaacgagggtgac
cgtttcataccacttcacgaaccaagtatctggcagtccggagttcaccactgtaacttg
ggcaggacttgtcagcaggatccgaccattagcgacttgaacgaagatgtggatgtgtac
agggcattggtcagtaacgaactgttcgacactgccattgacgatttgcaagatttgtcg
ccgaacacgaaggtacgtcgtctgttcgaatattccaaacagacgaccagtccgtcgaac
atgaggcgtgctgcggcggaatcgacttgtccgttgacaatatccccactcagtccgctg
agtcagaggctgttggtcaggcctcggcgttcggagcgcaagatttacaggacgccgtac
aagatattggacgccccggagttgcaggacgacttctaccttaatttggtcgattggtcc
aaggagaacgtgttggccgttggtctcggctcgagcgtctacttgtggtgcgccagaaat
ggccaagtgaccaaactgtgcgatatggtgcctcatacggatatagtaaccgcggtcagt
tgggccgcggacggccggacgttggccgtcggtacgcagcgcggctcgtgtcagatttgg
gacgccaacgctcagctggaccggcagaacttctttggtcacttgtccaggatcggctgc
ttggcttggaacggcgacacggtcacgtccggcagccgggaccggcagattgtggtacgc
gacttgagggcgtcgggcgcgcaccaggagcgccggctgctcggccacaggcaggaggtg
tgcggtttgaaatggtcgcccgactacgagtacatggcttcgggcgggaacgacaatcag
ctgatgatctggacactggccagcgacaagccaatccaggtgaatcggcaacactgcgcg
gcggtcaaagcgatcgcctggtcgccgcatcatcccggcctgctggtgtccggtggtggc
acggccgatcggtgtttgaaattttggaacacactgactggtcagccggtgcgcagcgtc
gatacgggatcccaagtttgcaacgtgctttggtcacgtcactcggacgagttggtcagc
acgcacggatattcgcaaaatcagattctcgtctggaaatatccgaccctggaccgcctg
gtcaagctggttggtcactcgtcacgcgtgctctatctgtccatgtcaccagacggtgag
tcgattgttaccggtgccggcgacgagacgctacgtttttggagggtttttgaaaaagac
agccaaactcgtggtcacttgtcgccattggctacacactctgcaatgagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system