KEGG   Trichinella spiralis: Tsp_09897
Entry
Tsp_09897         CDS       T01609                                 
Name
(RefSeq) putative GYF domain protein
  KO
K13099  CD2 antigen cytoplasmic tail-binding protein 2
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsp01009]
    Tsp_09897
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsp03041]
    Tsp_09897
Protein phosphatases and associated proteins [BR:tsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     Tsp_09897
Spliceosome [BR:tsp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    Tsp_09897
SSDB
Motif
Pfam: GYF
Other DBs
NCBI-GeneID: 10907914
NCBI-ProteinID: XP_003370683
UniProt: E5SXN8
Position
Unknown
AA seq 384 aa
MPKRKVTFSNENRIISVEEDVAGEPPNRKMKSYNEPQSSNVDEGSSVSNKCNSSLVASDG
ETAGPLQYESKHTLDSDEEEDQKYEKLNVQDVEGQEEKTIDFDEEIKITPFNMLEEMDEG
HFDSEGNFIFNRNSEDMKDAWLDNIDWGKVKKDAGHLWDTEEQAYNLQADGAGDSASPSP
VDRMEIFANILEFMKPGETVTRTLKRLGGNKSSIESRQRRWKMKKNCDEASTSATVSQDE
QNVIKLTELVNLLVSDGLFEVYGYTYEKFNFELKSNQNLKNQEDESKSSTLDMFSEDVDE
SQLYKNEIAAKRARKSESEDDTGVQWEFKWTDDESAPVYGPHSTQQMLNWTKDGYFKNGV
MVRRYDEPNARFYSSKRIDFELYM
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgcctaaaagaaaagttacgttttcaaatgaaaatagaattatttctgttgaagaagac
gttgctggtgaaccgccgaatcgaaagatgaaaagctacaatgaaccacaatcttcaaat
gtggatgaaggcagcagtgtttccaataagtgtaacagttcgttggtcgcatctgacggg
gaaacagctgggcctttgcaatatgaaagcaagcacaccctagacagcgacgaagaagaa
gatcagaagtatgaaaagttgaatgttcaggatgttgaaggtcaagaagaaaagacaatc
gattttgatgaagaaataaaaatcacaccatttaatatgctcgaagaaatggacgaaggc
cattttgattctgaaggcaattttatattcaatcgaaacagtgaagacatgaaagacgca
tggttggacaacatcgactggggaaaggttaaaaaagatgccggacatttgtgggataca
gaagagcaagcttataatttacaagctgatggtgccggtgattcggctagtccatcaccc
gtggacagaatggagatttttgccaacatattagaatttatgaaaccaggcgagacggtt
acaagaactttgaaacgactcggtgggaataaaagcagcatcgagtccagacaacggagg
tggaagatgaaaaaaaattgcgatgaagctagcacgtcggcgacagttagccaagacgaa
cagaatgtaattaagcttactgaactggttaacttgctcgtctcagacggtctctttgaa
gtttacggttatacgtatgaaaaattcaattttgaattgaaaagtaatcaaaatttgaaa
aaccaagaagacgaatcgaaatcgagtacactagatatgttttctgaagatgtggacgaa
agccagctgtacaaaaatgaaattgctgctaaacgtgcaagaaaatccgaatcagaagat
gatactggtgttcaatgggaattcaagtggactgatgatgaatcggcaccagtttacggc
ccacattccacacagcagatgctcaactggacaaaagatggttatttcaaaaatggagtt
atggtgcgccgatacgatgaaccgaacgcacgcttttattcgtcaaaaagaattgacttt
gagctgtatatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system