KEGG   Trichinella spiralis: Tsp_10448
Entry
Tsp_10448         CDS       T01609                                 
Name
(RefSeq) putative ATPase, AAA family
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tsp01002]
    Tsp_10448
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:tsp03110]
    Tsp_10448
Peptidases and inhibitors [BR:tsp01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   Tsp_10448
Chaperones and folding catalysts [BR:tsp03110]
 Other chaperones and cochaperones
  AAA proteases
   Tsp_10448
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 AAA_22 RuvB_N AAA_16 TIP49 nSTAND3 AAA_17 AAA_2 AAA_14 AAA_28 Mg_chelatase AAA_33 IstB_IS21
Other DBs
NCBI-GeneID: 10902507
NCBI-ProteinID: XP_003372890
Position
Unknown
AA seq 788 aa
MFRFQKLPSVLPSHLRSQQNVNYFWSVYCKNRSAFFELPLYAAAPKGFGKFFPDGSGEKH
SEDGEGKKDGSNDPSGESGVSPENSNPKDPPSDWSQFFKGEPFAAFRKRGSSGSGGGGGG
EDNRWIFPTLSAGATVASVLTLYYYLSYKEITWKDFINIYLSKGLVEKVEVINKKWVRVC
LNPSGSVETKIPWFSIGSVESFERSLENIQKELNIDVRNYVPVAYRNEIDANSAISAMPS
FLLLMFFLWGIRRFSSFSAVSGGKRRGPGGIFGFGETTARVINKEDINVSFKDVAGCEEA
KLEIMEFVNFLKNPDQYLKLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSE
FLEMFVGVGPARVRDMFSMARKRAPCILFIDEIDAVGRVRGQRFSSGGSEQENTLNQLLV
EMDGFQTNNANVIVMAATNRVDILDKALLRPGRFDRQIYVPAPDIKGRASIFRVHLGPLL
VDLDKVELSRKLAALTPGFTGADIANICNEAALIAARNLSDKIQMEHFEQAVERVVAGME
KKTQVLQPDEKKTVAFHEAGHAVAGWYLEHADPLLKLSNFCFQVSIIPRGKGLGYSQYLP
KEQYLYTKDQLFDRICMTLGGRVAEEIFFDRITTGAQDDLQKITQIAYAQIVKFGMSDKV
GPVSFNTPEPGDMVIDKPYSEKTAQLIDQEVRDLVERALKFTRDLLHKHKDDVEKVAMRL
LNKEVLSRSDMLELLGPRPFREKHTYEEFVEGTGSLDEDVTLPEGLQNWNKTKDEQKSKT
DTKKATIV
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgtttcgcttccagaaattaccatctgttttgccttcacatttacgaagccagcaaaat
gtgaattatttttggtcagtttattgcaagaatcgctctgcattttttgaacttccatta
tatgcagcagcaccgaagggatttggaaaatttttccccgatggcagtggtgaaaagcat
tctgaagatggtgaaggaaaaaaagatggttcaaatgatcccagtggtgaaagtggtgta
tcccctgaaaactctaatccaaaggatcctccatcagattggagtcagtttttcaaaggc
gaaccatttgccgcatttcggaaacgaggttctagtggcagtggcggcggcggcggtggt
gaggacaaccgttggatatttccgacgttatctgcaggagcaaccgttgcttcagtttta
acactgtactactatttgagttataaagaaattacttggaaggattttataaatatctac
ttatcgaaaggcttggtcgaaaaagtagaagtgataaacaagaaatgggtccgcgtatgc
ttgaatccatcaggttccgttgaaacaaaaatcccttggttcagcattggcagtgtggag
tcgtttgaacgaagtttggaaaatattcaaaaggaattgaacatagacgttcgtaattat
gttccagttgcatacagaaatgaaattgatgccaacagcgctatatctgctatgccaagc
tttttgcttctgatgttctttctctggggtatacgtcgatttagtagttttagtgcggtc
agcggtggaaagcgccgtggacccggtggtatttttggctttggcgaaactacagctcgt
gtgattaataaagaagatattaatgtctctttcaaagatgtggctggttgtgaagaagcg
aagttggaaattatggaatttgtgaattttttgaaaaatcccgaccaatatttgaaattg
ggtgcaaaaattcccaaaggtgccattttgaccggtccgcctggcactgggaaaactctg
ctggccaaagcgacggctggtgaagcgaacgttcctttcataacagtcagtgggtcggaa
tttttggaaatgtttgtcggcgtcggtccagctagggtgcgagatatgttttccatggcc
cgaaaacgtgctccttgtattttgttcattgacgaaatcgacgctgttggtcgtgtgaga
ggacagcgtttttccagtggtggttctgaacaggagaatactctcaatcagttgcttgtt
gagatggatggttttcaaacgaacaatgcaaatgtgatcgtgatggcggcgacgaaccgt
gtggacattttggacaaggcgttgcttcgtccgggccgtttcgaccgtcagatatatgtg
ccggcgccggatatcaaaggtcgtgcgtcgatatttcgcgtccaccttggaccgcttctt
gtcgacttggacaaagttgaattgtcgcgaaaattggccgctttgactcccggatttact
ggagctgacatagcgaacatatgcaacgaggcagcgttgattgcggcgcggaatttgagc
gataaaattcaaatggaacattttgaacaagctgtggagcgtgtcgtggccgggatggag
aagaaaacccaagttttgcaaccagacgaaaaaaagactgtagcttttcacgaagcaggc
catgccgtagctggctggtatttggaacacgctgatcctttgcttaagttgtcgaatttt
tgctttcaggtttccattattccacgtggcaaagggctcggctattcccaatatttgccc
aaagagcaatatttgtacaccaaagatcaactatttgatcggatttgcatgacgcttggt
ggtagagtagctgaagagatctttttcgatcgaattacaactggtgcccaggatgatttg
caaaaaataactcaaatagcctacgcccaaattgtgaaatttgggatgagtgacaaagtg
gggccagtgtcgtttaatactccggaacctggtgatatggtgattgataaaccgtacagc
gaaaagacggcacagttgattgatcaagaggtgcgggatttggttgaacgagctttgaaa
tttaccagggatttattgcacaagcacaaagacgacgttgaaaaagttgcaatgcgattg
ttgaacaaggaggtcctttcgcgaagtgatatgctggaattgttgggacctcgacctttc
cgagaaaaacacacctacgaagaatttgtcgaaggcacgggaagtttggacgaagacgtc
acgctgcctgaaggtttgcagaattggaataaaacgaaagatgagcaaaaatcgaaaacc
gatacaaaaaaagcaactatcgtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (68)   

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