KEGG   Trichinella spiralis: Tsp_10866
Entry
Tsp_10866         CDS       T01609                                 
Name
(RefSeq) putative phenylalanine--tRNA ligase
  KO
K01889  phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Organism
tsp  Trichinella spiralis
Pathway
tsp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Tsp_10866
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tsp01007]
    Tsp_10866
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tsp03016]
    Tsp_10866
Enzymes [BR:tsp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     Tsp_10866
Amino acid related enzymes [BR:tsp01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   Tsp_10866
Transfer RNA biogenesis [BR:tsp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Tsp_10866
 Prokaryotic type
    Tsp_10866
SSDB
Motif
Pfam: tRNA-synt_2d FDX-ACB Methyltransf_11 Methyltransf_25 Methyltransf_12 Methyltransf_31 Methyltransf_23 tRNA-synt_2 MTS
Other DBs
NCBI-GeneID: 10897234
NCBI-ProteinID: XP_003370257
Position
Unknown
AA seq 701 aa
MFNRRYIKNAYKQFCLSSSLLEQNCSPEFCVDSFTNVKQSILALVGRKLHRSPDSPLYIL
KRRIFDYFNLNYKTSTGRSLYATFDNFDPIVSKWQNFDSLLVPSDHICRSPSDTYYLNSH
QLLRTHTSAHQNELIASGLRHFLIVGDVYRRDQVDRNHYPCFHQLEGVHLFADYQLFQPD
IVDHCDLFEKGIRNYEKQETHTLECVTLVSKHLKQCLESMVTYLLSAEGKKVQMRWVKAY
FPFTHPSWELEILYRDNWIEILGCGVIEQKILENAGTGDLVGWAFGIGLERLAMQLFEIP
DIRIFWSKDSGILSQFSVADYNANIKFKPISRYPQCSNDISFWLADSNSFSDTDFYDLVR
SVGGDVVEQVNRIDEFVHPKTKKKSICYRITYRHMERTLTQEEVNVIHSAIAENAHKELG
VILYMRNILRLFNIHHLRRNLTNFNVFDRSLKRCQRDWAACQDNLDVFQYLNKEIAYRLT
DRIYDVKRMFTVAVDLGCGIGHIAEHLYKEHIGVLLQSDISLEMITGAKVSKEVPTLKYR
ADEEMLPLKDSSVDLILSASSLHWINDLPGINFLLFFASFLFLFDAAEDLMALLQKAGFI
LITVDVDNIVVNYPDMFALMYEFRGMAESNASWLRAKTLRRDVLYAADSIYREMYGKDDI
LPATFQVLYIAGWKPGLNNPKTAKRGSANISFKNISTLFDR
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgtttaatagaagatatatcaaaaatgcatacaaacagttctgtttgagcagcagtttg
ctcgagcaaaactgttcgccagaattctgcgtggattcattcacaaatgttaaacagtca
atactggctctcgtaggaagaaaattgcaccgcagccctgattctccgttgtatattttg
aaacgtagaatttttgattatttcaatttaaattacaaaacttccactggtcgctcactt
tatgcaacattcgacaactttgatccaatagtatccaagtggcagaattttgacagttta
cttgtaccaagtgaccacatctgccggtcaccttcggacacttattacttaaattcacac
cagcttttgcgaactcacaccagcgctcatcagaacgaattgatagcttctgggcttcgt
cattttttgattgttggtgatgtataccgtcgagatcaagtagatcgtaatcattatcca
tgctttcatcagcttgaaggtgttcatttgtttgctgattatcaactatttcaacccgat
atcgttgatcactgtgatttatttgaaaaaggtattcgaaattatgaaaaacaagaaact
cacacgttggaatgcgtaacattggttagcaaacatttgaaacaatgcctggaaagtatg
gttacttatttgctttcagcagaagggaaaaaagtgcagatgcgatgggtgaaagcttac
tttccatttacacatccttcgtgggagttggaaattttataccgcgataattggatcgaa
attctaggatgcggagtgatcgagcagaaaattttagaaaacgcaggtactggtgatctt
gtgggttgggcattcgggataggtttggaacgtttagcaatgcagttgtttgaaattcca
gacatacgcattttctggagcaaagacagtggcattctgtcgcaattttccgttgcagat
tacaatgcaaatataaagtttaaaccgatcagccgatatccacagtgcagcaacgatata
tcattttggttggcagattcgaattcgttttcagatacggatttttatgatttggttcga
agtgtcggtggagatgttgttgagcaagtgaatcgcattgatgaatttgtgcatccgaaa
acgaaaaagaaaagtatctgctatcgtattacttatcgacacatggaaagaacacttact
caggaagaagtcaacgtaattcactcagctattgcagaaaatgctcataaagaactagga
gtgattctctacatgcgaaacattttacgtttgtttaacatccaccacttgcggagaaat
ttgaccaatttcaacgttttcgaccgatcgcttaagcgatgtcaaagagactgggcagca
tgccaagataatttggatgtatttcagtatttaaacaaggagattgcttatagactgaca
gatcgaatttacgacgtcaaaagaatgttcactgttgctgttgatttgggttgtggaatt
ggacatattgctgagcacctttacaaagagcatattggtgtgcttttgcaaagcgatatc
agtttagagatgatcactggagccaaggtttccaaagaagtgccaacactgaaatatcgg
gcagacgaggagatgttgcctttgaaagatagctctgtcgatctcattttatcagcatca
tccttgcactggataaacgacttgccaggcattaattttctgttatttttcgcttcattt
ctttttttatttgatgcagctgaagatttgatggcattgctccaaaaagcaggctttata
ttaataactgttgacgtggataatattgttgtcaattatccagatatgtttgctttgatg
tacgagttccgaggaatggcagaaagcaacgcaagttggcttagagcgaaaaccttgcgt
cgagatgtactttacgccgctgattcaatctatcgggaaatgtacggtaaagatgatatc
ttgccggctactttccaagtgctctacattgcgggttggaagccaggtttgaataatccg
aagacagctaagcgcggttcggcgaatatttcttttaaaaacatcagcactttgtttgat
cgataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (45)   

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