KEGG   Trichinella spiralis: Tsp_10880
Entry
Tsp_10880         CDS       T01609                                 
Name
(RefSeq) calcium-activated potassium channel slo-1
  KO
K04936  potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tsp04040]
    Tsp_10880
Ion channels [BR:tsp04040]
 Voltage-gated cation channels
  Potassium channel, calcium- and sodium-activated (KCa/KNa)
   Tsp_10880
SSDB
Motif
Pfam: BK_channel_a Ion_trans Ion_trans_2 TrkA_N Lig_chan
Other DBs
NCBI-GeneID: 10897248
NCBI-ProteinID: XP_003370271
Position
Unknown
AA seq 789 aa
MVQFCLIRYTVRDRVVLVFVLSIGSLIIYFYDASHPNFQVETCISWSHSPSQQIDLAFNI
FFLIYFFIRFVAATDKVWFLLEVYSFIDYFTIPPSFVAIYLERTWLGKLFHRLRFLRALR
LMTVPDILQYLNVLKTSSSIRLAQLVSIFVSVSLTGAGFIHLLENSGDPFQNFQNPQRIT
YWECVYFLVVTMGTVGYGDICCKTLLGRFFMVFFILGGLAMFASYVPEIADLIGSRQKYG
GEYKAENGKRHIVVCGYITYESVTHFLQDFLHEDRDDVDVEVVFLHRVPPDLELEGLFKR
HFTKVEFFQGTVMDSIDLSRVKVHKADACLILANKYSSDPDAEDAANIMRVISLKNYSPE
IRVIVQLMQYHNKAYLLNIPSWNWRTGDDVICLAELKLGIIAQSCLAPGFSTMMANLFAM
RSFKTSMSTPGWLNDYLRGAGMEIYTESLSHSFVGMTFPETAELMFTRLKLLLLAIEIKD
DESLECNIIINPESNVIIKVNTQGFFIAQSADEVKRKGVRHVILANRTAKVLSPNERSLQ
NSLDDRNKGNLIEGTSEIDLKSSLREAGLPLKVGLSDPDDGSGDPWQRVDEEDMKYDSTG
MFHWCKARPIEDIILDREQASVTLLHNHVVLCLFADRHSPLIGLRNFVMPLRASNYHYHE
LKQVVIVGDVEYLRREWKMIQNLPKIIILNGNPLSRADLRAVNINMCDMCVIISARIPNP
NEDPTLTDKEAILASLNIKAMNFDECSPNLTAAMSGTILVNSRSPSMMLCSNPIRSGTEI
LMLTELGRF
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggttcagttttgtctgattcgttacactgttcgtgatagggtagtgctcgtgtttgtc
ctcagcattggctcgctcattatctatttttatgatgcctcacacccaaattttcaagta
gaaacctgcatctcatggtcacacagtccgtctcagcaaattgatctcgcctttaatata
ttttttcttatatattttttcattcggtttgttgctgcaactgacaaagtttggtttttg
cttgaagtgtacagcttcattgactactttaccatacctccatcttttgtcgcaatttat
ttggagcgaacatggctaggcaagctttttcaccgtttacgatttttgcgtgcgttgaga
ctgatgactgttccggatattctgcaatatttgaacgtgttgaaaaccagcagttcaatt
cgactagctcagttggtcagcatttttgtatccgtttctcttacaggagccggtttcatt
cacctgctagaaaacagtggcgatccatttcagaattttcaaaatccacaacgcatcaca
tactgggaatgtgtatactttttagtggtcacaatgggtactgtaggctatggcgatatt
tgttgcaaaactttgcttggtcgttttttcatggtcttcttcatactcggcggccttgct
atgtttgcaagctatgtgccagaaattgcggacctgataggttctcggcaaaaatatggt
ggtgaatacaaagctgagaatgggaaaagacacattgtcgtctgtggttatattacttat
gaatcggtgacgcacttcttgcaagatttcttgcatgaagatcgcgatgatgtagacgta
gaagtggtgtttttgcatcgggtgcctcctgatttggaattggaaggattgtttaagcgt
cactttacaaaagtagaattcttccagggtacagttatggattctatagacctcagtcga
gtaaaagttcacaaggcagacgcatgcctaatcctagccaataaatattcgtcagaccca
gacgcggaagatgctgcgaacattatgcgggtgatttcactgaaaaactactctccggaa
attcgcgtcattgtacaactgatgcagtatcacaataaagcatatctgttgaacatacct
agttggaattggcgaactggggatgatgttatctgcctagctgagctgaagttgggcatt
attgctcaaagttgtctagcacccggattttccaccatgatggctaacctgtttgccatg
cgttcatttaaaacgtcaatgagcacgccaggttggttgaatgattatttgcgaggggct
ggaatggaaatttacacggaaagtctatcgcacagctttgttggtatgacgtttcctgaa
acggcagaattgatgtttactcgtttaaaactgctcctcttggcaattgaaattaaggac
gatgaaagcttagaatgcaacattattatcaatccagagtcaaacgttatcatcaaagta
aacacccaagggtttttcatcgcacaatctgcagacgaagttaaacgaaaaggggttcgg
catgtaattttggccaatcgaacagcaaaagtgttatcaccgaatgaacgatcactgcag
aattcattagatgaccgaaataaaggaaatcttattgaaggaacgtctgaaattgacctc
aaatccagtttgagagaagcagggctaccattgaaagttggcttgagtgatccggacgat
ggcagcggtgatccttggcaacgggttgacgaagaagacatgaagtacgattcaaccgga
atgtttcactggtgcaaagcacggccaattgaagatatcattttggatcgagagcaagcg
tcagtgacacttttgcataatcatgttgtgctttgcttattcgctgatcgtcacagtccg
ttgattggactgcggaattttgtaatgcctcttcgcgcgtcgaactaccattaccacgag
ttgaagcaagtggtaatagtgggcgatgtagagtatttacgtcgtgaatggaagatgatc
caaaatttgccaaaaattataattctaaacggaaacccgttgagtagagcagatttacga
gcagtaaatatcaacatgtgcgacatgtgcgtcattatctcagcaagaatacccaatcct
aatgaagatcccacgttgactgacaaagaagcaatattggcatcgttgaatattaaagcg
atgaattttgatgaatgctcacctaatttgactgcagcaatgtctgggaccattctagtg
aactctcgaagcccgtcaatgatgctttgttccaacccaattcgatctggaactgaaata
cttatgcttactgagttgggtaggttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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