KEGG   Trichinella spiralis: Tsp_11193
Entry
Tsp_11193         CDS       T01609                                 
Name
(RefSeq) lamin-L
  KO
K07611  lamin B
Organism
tsp  Trichinella spiralis
Pathway
tsp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    Tsp_11193
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tsp04812]
    Tsp_11193
Cytoskeleton proteins [BR:tsp04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type V: Nuclear lamins
     Tsp_11193
SSDB
Motif
Pfam: Filament LTD YabA Pox_A_type_inc Laminin_II TPR_MLP1_2 Baculo_PEP_C Myosin_tail_1 GapR_DNA-bd DUF1033
Other DBs
NCBI-GeneID: 10900654
NCBI-ProteinID: XP_003372156
Position
Unknown
AA seq 541 aa
MSRSVRRTTQMSYIQSESSSSPNTPSVRTTSAEQTSSESPLTPTCQSRLQEKHQLQHLND
RLAQYIERVRQLEAENQRLSLSIRNTEDIVSKERNSLRDTYERELAEARRLLDECSKAKA
RAFLELNKNMTYMDELQTKVERLERHLQECEERRAQLDGQVQDLTTRLNASEAQRKHWEN
EAKKLCEECDSLTSQLANVQKKHDAEALTRVDLENKVQSLREQLAFNKQLYEKMQTLRES
AERNRDSANTAREELGRANSQLSYFETERAKYEEMVRFVVLLIAMFVANLEKKNRELESR
YTRLHDEMYARLSSRDTEIRQLRDEIALMIQQYKDLMDIKVQLSVEIEAYRRLLEGEEKR
LHLSPTPPPPGSESPAVRPKKRRILHERETEVYATYETNSECIGDIEIIDHDVDGLFVKL
NNKSSKDLSLNGWSVVRAGTDREVTYKFHPKLVMKPGKQLTVWSANAGVQHNPPSDLVMK
NQHWPVGNRIRTSVVNPQDEEVAWRESVKSSRSERTTFRTGDPFDYGLEVRIGTDQRCSV
M
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgtcaagatcggttcgtcgtactacacaaatgtcctatatccagtcggaatcatctagt
agtccgaatactcctagtgtgcggactacatcagcagaacaaacatctagtgaatcgcca
ttgacaccaacctgccagtcgcgattacaagaaaagcatcaattacaacatctgaacgat
cgtttggcacaatacattgaacgtgtcaggcaattagaagcggagaaccaacgtttatcg
ttgagcatccgtaacactgaagatattgtttctaaagaacggaattctcttcgagacacg
tatgaacgcgaattggcggaagctcgacgcctgcttgatgaatgctcgaaagcgaaggcc
cgagctttccttgaattgaacaaaaatatgacctatatggatgaattacaaacaaaggtg
gaaagattggaacgtcatctgcaagagtgtgaagaacgtagagctcagcttgatggtcaa
gttcaagatctcactacgaggttgaacgcaagcgaagctcagcgtaagcactgggaaaat
gaggcgaagaaactttgtgaagaatgtgatagcttgacttcacaattggcaaatgtgcag
aaaaagcacgacgcagaagcactgactcgagttgacttggagaacaaggttcaatccctt
cgcgagcagttggcatttaacaagcagttgtatgagaagatgcaaacattgcgagaatcg
gcagaacgaaatcgagattctgcgaacactgccagagaagagctcggtagagccaacagt
cagctttcatattttgaaaccgaacgtgcaaaatacgaagaaatggtacgatttgttgtt
ttgctgattgcgatgtttgttgctaatttggaaaagaaaaatcgtgaattggaatctcgc
tatacccgtttgcacgatgaaatgtacgcacgtttgtccagtcgcgatacggaaattcga
caactgcgtgacgaaattgctttaatgattcagcaatataaagatctgatggatatcaaa
gtgcaacttagtgttgaaattgaagcgtacagacgacttttggaaggagaagagaaaagg
ctgcacttatcaccgacacctccacctccaggttctgaatcacccgctgtgcgtcctaag
aagaggcgtattttgcatgaacgagagaccgaagtttacgcaacttatgagaccaattcg
gaatgtatcggtgatattgaaattattgatcacgatgtggatggattatttgtgaaattg
aataacaaaagttcaaaggatttgtctttgaacggatggagcgttgttcgagctggcacg
gatcgtgaagtgacgtataaatttcatccaaaacttgtgatgaaaccaggaaaacagctt
actgtatggagcgcaaatgctggcgtgcagcataatccaccatcggatttggtgatgaag
aatcaacattggccagttggaaatcgcattcgtacttctgtagtgaatccacaagatgag
gaagtagcttggcgtgaatctgtgaaaagcagccgttcagaaagaacgacgtttcgcact
ggtgatccatttgactacggactggaagtgaggattggaaccgaccaacgttgcagtgtt
atgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (36)   

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