KEGG   Trichinella spiralis: Tsp_12420
Entry
Tsp_12420         CDS       T01609                                 
Name
(RefSeq) putative BTB/POZ domain protein
  KO
K10443  kelch-like protein 2/3
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_12420
Ubiquitin system [BR:tsp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     Tsp_12420
SSDB
Motif
Pfam: Kelch_1 BACK Kelch_6 BTB Kelch_4 Kelch_2 Kelch_3 KLHL33-like_BTB_POZ Kelch_5 SANBR_BTB
Other DBs
NCBI-GeneID: 10897549
NCBI-ProteinID: XP_003369932
Position
Unknown
AA seq 648 aa
MVFKMDNIFICYRTEQLTTKQRTRLLRKLNLQEILREKALCDVVLVASYLNADSYEDSSS
SNSADVEIPAHRVILASACPYFKAMFQSNMSEAVQGKIRIHGVEPDALKSLVNFMYTSEI
AITAENVQYILIAADLLEMSEVTNCCCEFLKSQLSPSNCIGIQEFAEHHSCIALSIFARV
YCEQHFNEVIKNEEYLSLSLENLLQIISSDNLKTRCESDVCEAVMKWTRHDLERRQAYLP
KLFRCIRLPLLPIQYLFDVVEKNELVKASMPCKDLIIDALKHHLLFEKSSSCNARPRRLY
ASTDSTLGIIVIGGQVPRAVSNVDIFYISNYTWNSLNPMPNRRCRFGTASVDDRIYVIGG
FNGTTRVRYVEYFESMRGCWYSGPPLLARRSTLGAAVIDDVIYAVGGFDGSTGLNTAEML
DRRTREWEFIAPMSTRRSSVGVVAYNGNVAACKLVNCIFTNISLLYAVGGFDGAHKTCLK
SVERYDPRINRWQTVESMEFGRSGPGVAVYDGKLYALGGHDGPSVLNCVEVYDANGGGWQ
MLPCQMETCRRACVADHSLYAVGGDNGHSTLSSVEIYNVHVGSWSTLPTSMPLGRTYAGV
AAAKRGSFPLLSVPDLFYINISTLFCFIIELEEVMKSAGYSATVQHSN
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggtcttcaaaatggataatatttttatatgttatcgcactgaacaactaacgaccaaa
cagaggaccagattgcttcggaagttgaatttgcaagagattctgcgtgaaaaagcgtta
tgtgatgttgtattggttgccagctatttgaatgcagattcatatgaagatagctcgtca
tcgaatagtgcagatgttgaaattccggcacatcgcgtcattttggctagtgcttgtccg
tatttcaaagccatgttccagtcgaacatgtccgaagccgtacaaggaaaaattcgaatc
cacggtgtagaaccagacgctttgaagagcttggtcaatttcatgtacacatctgaaatt
gcaattaccgcagaaaatgttcaatacatcctcattgcggcagatttacttgaaatgtcc
gaagttacgaattgttgttgcgaatttttgaaatcacagctcagtccttcaaattgcatt
ggtattcaagagtttgctgaacatcattcatgcatagcactcagcatttttgctcgtgtt
tactgtgaacaacattttaatgaagtgattaaaaatgaagagtatctttcactgtctttg
gagaacttgctgcagataatcagtagcgataacttgaagacaagatgtgaaagtgacgta
tgtgaagcggtgatgaagtggactaggcatgatttggaaagacgtcaagcgtatcttccg
aagctttttcggtgcattcgattgccgttgcttcctattcagtatctgtttgatgtggtg
gagaaaaatgaattagtgaaagcaagcatgccatgcaaagatttgattattgacgcgttg
aagcatcatctactttttgaaaaatcatcatcttgcaatgccagacctcgaaggttgtat
gccagcacagattcgactcttgggattatcgtcattggtggtcaggtgccgagagctgtt
agtaatgttgacatattctacatcagtaattatacttggaatagcttaaatccaatgcct
aatcggcgttgccgttttggcacagcgagtgtagatgatcgtatttatgttattggtggt
tttaatggcacgactcgtgttcgttacgtcgaatattttgaatcgatgcgtggatgttgg
tactcaggaccaccattgttagcaagacgttctacattaggggcggctgttatagatgat
gtgatctacgcggtcggtggttttgacggttcgactggtttaaacacggctgaaatgctt
gaccgtaggactagagaatgggaattcattgctcctatgagcacaagacgtagtagtgtc
ggtgtggtggcttataacggtaatgttgctgcttgtaaacttgtgaactgtatttttacc
aacatcagcttattgtacgctgttggtggttttgatggagcacacaagacttgcttgaag
tcagtggaacgttatgatccgcggatcaatcgttggcaaactgtggaaagcatggaattc
ggaaggagtggtccgggcgttgctgtttacgatggaaaattgtacgcattgggcggtcac
gacggtccgtcggtgttgaattgtgtagaagtgtacgacgcaaatggaggtggatggcag
atgcttccatgtcagatggaaacttgccgacgtgcctgtgttgcagatcattcattgtat
gcggtcggcggtgacaatgggcattcgactctgtcctctgttgagatttacaacgtacac
gtgggcagctggtcaacactgccaaccagtatgccgttgggtcgcacctatgccggcgtt
gctgcagctaagcgaggctcttttccgttgttgtcggttccggatcttttttacatcaac
atctctacattattctgctttattatagagctagaagaagtaatgaaaagcgcagggtac
agtgcaacggtacaacatagcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (49)   

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