KEGG   Thamnophis sirtalis (common garter snake): 106540506
Entry
106540506         CDS       T06107                                 
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
  KO
K11861  deubiquitinating protein VCIP135 [EC:3.4.19.12]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tsr01002]
    106540506 (VCPIP1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106540506 (VCPIP1)
Enzymes [BR:tsr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     106540506 (VCPIP1)
Peptidases and inhibitors [BR:tsr01002]
 Cysteine peptidases
  Family C64
   106540506 (VCPIP1)
Ubiquitin system [BR:tsr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   OTU
    106540506 (VCPIP1)
SSDB
Motif
Pfam: VCIP135_N OTU OTU1_UBXL ubiquitin
Other DBs
NCBI-GeneID: 106540506
NCBI-ProteinID: XP_013911108
UniProt: A0A6I9XJN3
Position
Unknown
AA seq 1209 aa
MSQPPQQEQQPVATLVPKKKDRRIFSGTCPDPKCQARLFFPAHGPLSSGSIECTDCGQRH
EQRQLLGVEEVTDPDLVLHNLLRNALLGVSGAGPPRKNTELVKVMGLSNYHCKLLSPILA
RYGMDKQTGKAKLLTEMNQGDVFDCALLGDRAFLIEPEHVDTVGYGKDRSGSLLYLQDTL
EDIKKANNSQECLIPVHVDGDGHCLVHAISRALVGRELFWHALRENLKKHFMENLSRYKA
LFHDFIDAAEWEDIINECDPLFIPPEGVPMGLRNIHIFGLANVLHRPIILLDSLSGMRSS
GDYSATFLPGLIPEEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMKLLP
KAWGVPQDLIKKYIKLEDDGSCVIGGDRSLHDKYLMRLVAAMEEVFMDKHGIHPSLVADV
HQYFYRRTGVIGVQPEDVTAAAKKAVIDNRLHKCLICCALSELHVPPEWLAPGGKLYNLA
KSTHGQLRPDKNYSFPLNSLVCSYNPVKDVLVPDYSLSSLTACNWCHGTLVRRVRSDGSV
VYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESD
QSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNIDSAHARR
ADDMQQGQDLASQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNIAEQAPIMQKRKTEK
WKQVQKGPARTVSPGTIPDGSSSAPATPTKTPYSPISTKEKKIRITTNDGRQTMLTLKST
TTFLELQESIAREFNIPPHLQCIRFGFPPKELLPPKEGQENEPVPLLHGDRITIEILKGK
EDNNQASSVHSAHVVKHDDIAVTSRITSKELQEQIDKEMYSLCLLATFMGEDVWSYAKGL
PHLFQQGGVFYNIMKKTMGLADGEHCTFPHLPGKTFVYNATEDRLELCVDAAGHFPVGSD
VEDLVKEALNQVRAEASSRSREASPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGS
GTSSQQLHPKVREAPLGRKQNIGTDFNTNSAKLDPSMYTGDSGNSELIRIAPGVGTMRDS
RQLDPNLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQLATNDFSQRKLEATSSSVKTKSP
QVSLTESFTLSSGSGRLNTEITDSNMSNALAASFSTRSKAQKGNSVEEPEEMDSQDAEIT
NTTEPMDHS
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgtctcagccgcctcagcaggagcagcagccagtggcaacgctggtcccgaagaagaag
gaccggcgtatcttctcgggcacttgtcctgaccccaagtgtcaggcgcgcctgtttttt
ccggcgcacgggcctctaagcagcgggagcatcgagtgcacggactgtgggcagcgtcat
gaacagcggcagctgctgggagtggaggaggtgacggatcccgacttggtgctgcacaat
ttgctgcggaacgcactgctaggagtgagtggggcggggccccctagaaagaacaccgag
ctggtgaaagttatgggcctgtcaaactatcactgcaagctgctctcgcctattctggcc
cgctatggcatggataaacagaccggcaaagctaaactcctaactgagatgaaccaagga
gatgtttttgactgtgctctgcttggggaccgtgcctttcttattgagcctgagcatgtc
gacactgtaggatacggcaaagatcgctctggtagcctcctgtacctgcaggacacctta
gaggatattaagaaggctaataatagccaggagtgcctcatcccagtccatgtggatggt
gatggccattgtttagtccatgcaatttcccgagcactggtgggtagggaactcttctgg
catgctttgcgggagaacctcaagaagcactttatggagaatctcagccgctataaagcc
ctttttcatgattttattgatgcggcagaatgggaagacataatcaatgaatgtgacccc
ttatttattcctcctgagggtgtaccgatgggtcttcgaaacatccacatttttggacta
gccaatgttttacatcggcccatcatcctcttggattccttgagtggaatgcgtagttca
ggggactattctgccacattccttcctggattgataccagaagaaaaatgcatggggaaa
gatggcatgctgaacaaaccaatttgtattgcctggagtagttctgggcgtaatcattat
attcctctggttggaataaaaggtgctgctttgcctaaattgcctatgaaattacttcct
aaagcttggggagtgcctcaagaccttattaaaaagtatatcaaattggaagacgatggt
agctgtgtgattggaggagacagaagtttgcatgataaatacttgatgaggctagttgca
gccatggaggaagtttttatggataagcatggcattcatcccagtttagtagctgatgta
catcagtacttctatcggcggactggtgtaataggagttcagcctgaagatgttacagca
gctgctaaaaaggcagttatcgacaaccgacttcacaagtgtctcatttgttgtgctctt
tcagaacttcatgttcctccagaatggctagctccaggagggaagctgtataatcttgca
aagagtacccatggtcagttaaggcctgataaaaattacagtttccctctgaacagtttg
gtatgttcctataatcctgtaaaggatgtactagtaccagactacagtttgagtagtctg
actgcctgtaactggtgtcatggcacattggtgcgtcgtgtgagaagtgatggctctgtt
gtatatttggatggggacagaactaatactagatcaacaggtggcaaatgtggctgtgga
ttcaaacattattgggaaggcaaagaatatgacaatctccctgaagctttccctattact
ttagagtggggtgggagggtggtaagagagacagtctattggttccaatatgaaagtgat
caatctctgaacagcaatgtatatgatgttgcaatgaaactcgttactaagcactttcct
ggagaatttggtagtgagattcttgtccagaaagttgtcaatacaattctgcatcaaaca
gccaaaaagaaccctgatgattacactcctgtaaacattgatagtgctcatgcccgaaga
gccgatgatatgcaacaaggacaagatttggcatctcagcttccaaccaaaattattctt
actggacagaaaacaaaaacattgcacaaagaagaactgaatatgagtaaaactgaaaga
actattcaacaaaacattgcagaacaagcacctataatgcaaaaacgaaaaactgaaaaa
tggaagcaagtacaaaaagggccagctagaactgtgtctcctggtactattcctgatggg
tcatcctctgcacctgctactcccaccaagactccttattctccaatatctacgaaagaa
aagaaaattcgcataacaacaaatgatgggcgacagaccatgctcactttgaaatccact
acaacatttctagaattgcaggaaagcatagctagagaatttaatattcctccacatttg
caatgtattcgctttggctttcctcccaaggagctgctgccacctaaggaagggcaagaa
aatgaacctgttcctctgctacatggagatagaataaccatagagattcttaaagggaag
gaagataataaccaggctagttcagtacattcagctcatgttgtgaagcatgatgatatt
gctgttactagcagaattacttccaaggaacttcaagagcaaatagacaaggaaatgtac
tctttgtgtcttcttgcaacatttatgggggaagatgtttggtcttatgcaaaggggctt
cctcatctgttccagcagggtggtgtattctacaatataatgaagaaaacaatgggtctg
gctgatggtgaacactgtacttttccacacttgcctggcaagacctttgtatacaatgca
acagaagatagattggaactttgtgtggatgctgctggtcatttccctgtaggttctgat
gtggaagacttggttaaagaggccctaaatcaagtacgagcagaggcttcttcaagaagt
agggaagcaagtccttcacatggacttctaaaattaggtagtggtggagtagttaaaaag
aaatcagagcaactccacaatgtaactgcatttcaaggaaaaggccattctctaggcagt
ggaaccagtagccagcagcttcatccaaaagttagggaagctccacttggaagaaagcaa
aacataggtacagatttcaataccaattctgctaaattggacccttccatgtacaccggt
gattctggaaatagtgaacttatacggatagctcctggagtaggaacaatgagagatagt
agacaacttgatcctaatttaattgaggcacagcggaaaaaattgcaggaaatggtttct
tcaattcaagcatcaatggacagacatctgcgagatcaaaatacagagcagttggcaaca
aacgatttttctcaaagaaaattagaggcaacaagttcatcagttaaaacaaagagccct
caagtgagtttaactgaatcatttactttatcaagtggcagtggtcgtttgaatacagaa
ataactgatagtaacatgtcaaatgcattggcagcatcattctccacaagatcaaaagcc
caaaaaggaaattctgttgaagagcctgaagagatggatagccaagatgcagaaattact
aatacaactgagccaatggatcattcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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