KEGG   Thamnophis sirtalis (common garter snake): 106541323
Entry
106541323         CDS       T06107                                 
Symbol
GTPBP4
Name
(RefSeq) nucleolar GTP-binding protein 1
  KO
K06943  nucleolar GTP-binding protein
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106541323 (GTPBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsr03009]
    106541323 (GTPBP4)
Ribosome biogenesis [BR:tsr03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    106541323 (GTPBP4)
SSDB
Motif
Pfam: NOG1_N NOG1 NOGCT MMR_HSR1 FeoB_N Ras Dynamin_N RsgA_GTPase AIG1 GTP_EFTU Roc Arf DUF2362 G-alpha Lip_prot_lig_C
Other DBs
NCBI-GeneID: 106541323
NCBI-ProteinID: XP_013912199
UniProt: A0A6I9X9C1
Position
Unknown
AA seq 634 aa
MALYNFRKIMVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKYTQQNYHD
RLTQIIMDFPKLDDIHPFYADLMNVLYDKDHYKLALGQINIAKNLIDNVAKDYVRLMKYG
DSLYRCKQLKRAALGRMCTIIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG
KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVIDTPGILDHPLEDRNTIEMQA
ITALAHLRSAVLYVMDISEQCGHSLEEQLALFENIKPLFANKPLIIVANKCDVKRISELS
EQNQKIFAELEADGLPVIETSTMTEEGVIQVKTEACDRLLAHRVGTKMKGNKVNDVLNRL
HLALPTKRDNKERPPFIPEGALMRKKHMEVDGPKKKLEKDVEMEMGDEYILDLKKYWDLM
NPSEKYDVIPEIWEGHNIADYIDPDIMKKLEQLEKEEELKEKAGEYDSDSESEDEEMMGI
RQLAQQIREKKKLKILESKEKDIHGPRMPRTAKKVQQKTLEQEMTNLGLSVTGNSDVHYL
AGGRRSRSITRKRKREDSEPPASMPVSRSRSTTPRDVSGLRDARMIKKAKTMMKNAQKVM
NQLGKKGEADRTVFDLKPKHLFSGKRKAGPTTRR
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggcgctctacaacttcaggaagattatggtggtcccgtccgcgaaggacttcattgat
ttaacattgtccaagacccagcgaaagactcctacagtcattcataagcattatcaaatt
cacagaatccgtcatttctacatgagaaaagtaaaatatacccaacaaaattatcatgac
aggctcactcaaataattatggatttcccaaaacttgatgatattcatcccttttatgca
gatttgatgaatgtactctatgataaagatcattacaagctagctttgggacaaataaat
attgccaaaaatctgattgacaatgttgccaaagattatgtgcgtctgatgaaatacggg
gattccctttatcgatgcaaacagttgaaacgtgcagccttggggcggatgtgtaccata
atcaaaagacagaagcagagcctggaatatttagaacaagtacgacagcatttatcacga
ttaccaaccattgatcctaacacacggactctcctgttgtgtgggtaccccaacgttggg
aaatcaagtttcataaataaggtaacaagagccgatgtagatgtgcagccatatgcattt
accacaaaatctctgtttgtgggacacatggattacaagtatttgcgttggcaggtcata
gatactcctggtattttggaccatcctttggaagacagaaacaccattgagatgcaggcc
ataactgcacttgcccatctccggtctgctgtgctctatgtcatggatatatcagaacag
tgtggccacagcttggaagagcagctggcactttttgagaatattaagccattatttgcc
aacaagcctctaattattgtagccaataaatgtgatgtaaaaaggatttctgaactttca
gaacagaatcagaaaatatttgctgaattagaagctgatggacttcctgtgatcgagaca
agcactatgacagaagaaggtgttattcaggttaaaactgaagcttgtgacaggttgctg
gcccatcgggttggcaccaaaatgaaaggaaacaaagtgaatgatgtactgaacaggcta
catttagctcttccaacaaaaagggacaataaggaaaggcccccttttattccagaagga
gccttgatgcggaagaagcacatggaagttgatggcccaaaaaagaaactggagaaagat
gtggaaatggaaatgggggatgaatatatattggatcttaagaaatattgggatctgatg
aatccatctgaaaaatacgatgtgatacctgagatttgggaaggtcataacatagctgat
tacattgacccagacatcatgaaaaaattggaacaactggagaaagaagaagagctaaag
gaaaaagctggagaatatgatagtgattcagaaagtgaagatgaggaaatgatgggaatc
aggcagttggcacaacaaattcgtgagaagaagaaactgaagatcctggaatcaaaggag
aaggacatacacgggcccagaatgcctagaacagctaaaaaggttcaacagaaaaccctt
gagcaggagatgacaaatctgggacttagtgtaactggaaattctgatgtgcattattta
gccgggggaagaaggtcccgcagtatcacccgtaaacgcaagcgagaagattctgaacca
cccgcatctatgccagtaagccgtagccgctctactacccctcgtgatgtgtctggcctt
cgtgatgctaggatgataaagaaagcaaaaaccatgatgaagaatgctcagaaggtgatg
aatcaattgggcaagaaaggtgaggcagatagaactgtctttgaccttaaacccaaacac
ctcttttctgggaagagaaaagccggcccaaccacccgaagataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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