KEGG   Thamnophis sirtalis (common garter snake): 106541399
Entry
106541399         CDS       T06107                                 
Name
(RefSeq) sodium channel protein type 2 subunit alpha
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tsr04040]
    106541399
Ion channels [BR:tsr04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   106541399
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Neur_chan_memb Lustrin_cystein ATP-synt_B DUF6739
Other DBs
NCBI-GeneID: 106541399
NCBI-ProteinID: XP_013912318
UniProt: A0A6I9XNK9
Position
Unknown
AA seq 2006 aa
MAQSVLVPPGPDSFNFFTKESLAAIEQRIAEEKAKKSKQERKDVDDDENGPKPNSDLEAG
KSLPFIYGDIPPGMVSEPLEDLDPYYVNKKTFIVLNRGKAIFRFSATSAVYLLTPFNPLR
KIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLENFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLLWPPDNSTYTINVVSYFNSS
MGENGTFVNTTVTTFNWEEYVRDDSHFYFLEGQNDALLCGNGSDAGQCPEGYMCVKAGRN
PNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINL
ILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAALAAAAGESREFSEIG
GVGGFSESSSATSKLSSKSAKERKNRRKKRKQREQSEGDEKDDEFHKSESEDSIRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSKTSLFSFRGRAKDFGSENDFADDEH
STFEDNESRRDSLFVPHRHSERRNSTISQASRSSRVMPILPANGKMHSTVDCNGVVSLVG
GPPPLMSPTGQLLPEGTTTETELRKRRSSSYHMSMDFLSDPTARQRAMSIASILTNTMEE
LEESRQKCPPCWYKFANMCLIWDCWAPWLKIKHIVNLIVMDPFVDLAITICIVLNTLFMA
MEHYPMTQQFNNVLSVGNLVFTGIFTAEMFLKIIAKDPYYYFQEGWNIFDGIIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKNYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQP
MCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDFI
KRKAHECVEKAFVRKQKALDEIKPLEDLNNKKDSCISNHVIVDIAKDFNYLKDGNGTTSG
IGSSVEKYIIDESDYMSFINNPSVTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNA
SSSSEGSTVDVGLPPIGEQPEAEPEESLEPEACFTEGCIRKFKCCQVSLEDGKGKLWWNL
RKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILEM
LLKWVAYGFQAYFTNAWCWLDFLIVDVSIVSLTANALGYSELGAIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEMFSI
DEVDNQTECENLIERNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNV
EQQPHYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQTD
AMETILYRINFIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAEIIEK
YFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIF
GMSNFAYVKREVGIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNSGPPDCDPEIDH
PGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEM
FYEVWEKFDPDATQFIEFAKLSDFAASLDPPLLIPKPNKVQLIAMDLPMVSGDRIHCLDI
LFAFTKRVLGESDEMDALRVQMEDRFMAANPSKASYEPITTTLKRKQEEVSAVIIQRAFR
CYLLRLKVKKVSCMFNKDRIKEGTVIKEDMIIDKLNDNSTPEKNDMTPSTTSPPSYDSVT
KPDKDKYEKDKSEKEDRGKDVRDYKK
NT seq 6021 nt   +upstreamnt  +downstreamnt
atggcacagtcagtgctggtaccaccaggacctgacagcttcaacttttttacgaaagag
tcactggcagctattgaacaacgcattgccgaggaaaaggcgaagaagtccaagcaagaa
cgcaaagacgttgatgatgatgaaaatggaccaaaaccgaatagcgatttggaagctggc
aaatccctgccctttatatatggagacatacctccgggaatggtgtctgagccattggag
gacctggacccatattacgttaacaaaaaaacatttatagtattgaatagagggaaggca
attttccgattcagtgccacgtctgctgtgtacctgttaactcctttcaaccctcttaga
aaaatagctatcaagattttggtacattcattattcagcatgcttattatgtgcactatt
ttaaccaactgtgtatttatgaccatgagtaatcctccagaatggacgaagaatgtagaa
tacacgttcactgggatttatacctttgaatcactaataaaaattcttgcaaggggcttc
tgtttagaaaatttcactttcctccgggatccctggaattggttggacttcacagttata
acattcgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttc
agagtattgagagctttgaaaactatttctgtaattccaggcctgaagacaattgtaggg
gccctcattcaatctgtgaagaagctctcagatgtcatgatcttgaccgtgttttgtttg
agtgtatttgcactaatagggctccaacttttcatggggaacctgaggcataaatgcctg
ctttggccaccggacaattctacttatacaataaacgtcgtttcctatttcaatagctca
atgggagaaaacggtacctttgtaaatacgacagtgaccacttttaactgggaagaatat
gtccgtgatgacagtcacttttacttcttggaaggacaaaatgatgctttgctgtgtggc
aatggttcagatgcaggtcaatgtccagaaggatatatgtgtgtaaaagctggtagaaac
cccaactatggctatacaagttttgataccttcagctgggccttcttgtcactatttcgg
ctgatgactcaggacttctgggaaaatctttaccaactgactctacgtgctgctggcaaa
acgtacatgatcttttttgtcctggtgattttcttgggttctttctacctgatcaacttg
atcctggctgttgttgccatggcttatgaagagcagaatcaagccaccatggaagaagct
gagcagaaagaggcagagttccagcagatgctggaacagctgaaaaaacagcaagaagag
gctcaggcagcagctttagccgccgccgctggtgaatcgagagaatttagtgaaattggt
ggtgtaggtgggttctcagagagctcttcagcaacatcaaagttgagttccaagagtgct
aaggagaggaagaacagacggaaaaagagaaaacagagagaacagtctgaaggagatgaa
aaagacgatgaatttcacaaatcagaatcagaggacagcatccgcagaaaaggctttcgg
ttctctattgaagggaacagattaacctatgaaaaaagattttcttccccacaccagtct
ttgctgagcatccgcggatcgctgttttcccccaggcgcagcagcaaaacgagcctcttc
agcttcagaggccgagcaaaggattttggatcggagaatgattttgctgacgatgagcac
agcacttttgaagacaacgagagtaggagagattccctctttgttcctcaccggcacagt
gagcgtcgcaacagtaccatcagtcaggccagccgatcatctagggtgatgcctatcctt
ccagcaaatgggaagatgcacagcactgtggactgcaatggggtggtttccttagttggt
gggcctcctcctcttatgtcacccactgggcagcttcttcctgagggtaccaccacagaa
acagaactaagaaaaagacgctccagttcctaccacatgtcaatggattttctctcagat
cctactgcaaggcaaagagcaatgagtatagctagcatacttaccaacacaatggaagaa
cttgaggaatccagacagaagtgccctccctgctggtacaaatttgctaacatgtgctta
atctgggattgctgggctccttggctgaaaataaagcatattgttaatttgattgtgatg
gatccgtttgtggaccttgctattaccatctgcattgttttaaatactttgtttatggca
atggaacattacccgatgactcaacagtttaataatgtgctctccgttggaaacttggtg
tttactggcatcttcacagcagaaatgtttctcaaaataattgccaaggatccttattat
tatttccaagaaggctggaatattttcgatggcatcatagtcagcctgagcttgatggag
ttgggtcttgcaaatgtggaagggttgtctgttctaagatccttcagattgctgcgagtt
ttcaaactggcaaaatcttggccaacattaaacatgttaataaagattattggcaattca
gttggtgccttgggaaatttgactttggttttggctatcattgtcttcatttttgctgtg
gttggaatgcagttgtttggcaaaaactacaaggaatgtgtctgcaagatttccaatgac
tgtgaactcccacgctggcacatgaatgatttttttcattctttcttgattgtctttcga
gttctttgtggagaatggatagagactatgtgggattgtatggaggttgctggacaaccc
atgtgccttactgtcttcatgatggtcatggtgattggcaatttagtggttttgaatctt
tttctggccttgctcctgagctccttcagttcagacaatcttgctgctacagatgatgat
aatgaaatgaacaacctccaaattgcagtggctaggattcagaaaggaatagattttata
aaaagaaaagctcatgaatgtgtagaaaaggcgtttgtgagaaaacaaaaggctttggat
gaaatcaagccccttgaagatctaaacaataagaaagacagttgcatttctaatcatgtg
atagtagatattgccaaagattttaactatctgaaagatggcaatgggactaccagcggc
ataggaagcagcgtggaaaagtacatcattgatgaaagtgattacatgtcattcataaat
aacccaagtgtaactgtgacagtacccattgctgttggagaatcagattttgaaaattta
aatacggaggagtttagcagtgagtcagatctggaagaaagtaaagagaaactaaatgca
tctagttcatctgaaggtagtacagttgatgttggacttcccccaattggagaacaacct
gaagctgaacctgaagaatctcttgaaccagaagcctgttttacagaaggctgcatccgg
aaattcaagtgctgccaagtcagtttagaagatgggaaaggaaaactgtggtggaatctt
cggaagacttgttacaaaatcgtagaacataattggtttgagacttttattgtcttcatg
attctccttagcagtggtgctctggctttcgaagacatatacattgagcagcgcaagact
atcaagacagtcctggaatacgcagacaaggtcttcacctacatcttcattttagaaatg
cttctgaagtgggtggcttatggctttcaagcctatttcaccaatgcctggtgctggcta
gatttcctcattgttgatgtctctatcgttagcttaacagcgaatgccttgggctactct
gaacttggtgcaattaaatctcttaggactttaagagctttaagacctctaagagccttg
tcacggttcgaaggaatgagggtagtggtgaatgctctcttgggagcaattccatctatc
atgaatgtgctccttgtatgtcttatattctggctaatctttagcattatgggagtgaat
ctgttcgctggcaagttctaccactgtgttaacaccacaactggggaaatgttcagcatt
gatgaagttgacaatcagactgaatgtgagaatctcatcgaaagaaatgaaacagctaga
tggaaaaatgtaaaagtcaatttcgataatgtgggacttggctacctctctctgcttcaa
gtagccaccttcaaaggctggatggacatcatgtacgcagctgtagattcacgaaatgtg
gaacagcagccacattacgaggataacctttatatgtatctttattttgtcatctttatt
atctttggatccttcttcactttgaatttatttattggtgtcatcatagataacttcaat
cagcaaaaaaagaagtttggaggtcaagacatctttatgacagaagaacagaaaaaatac
tataatgcaatgaaaaaactgggctccaagaaaccacagaaacctataccaaggccagca
aacaaatttcaaggcatggtctttgattttgtaacaaaacaagccttcgacatcagcatc
atgattcttatctgccttaacatggttaccatgatggtagaaactgatgaccaaaccgat
gcaatggaaactattttgtatcggattaattttatcttcattgtccttttcactggagaa
tgtgtcttgaaactgatttcactccgctattattattttacaataggctggaatattttt
gattttgtggttgtcatcttatctattgtaggtatgttcctcgcagagattattgagaaa
tattttgtgtcccctaccttgttccgagtaattcgacttgccaggataggtcgaatcctg
cgtctaatcaagggggcaaaggggatccgcactctgctttttgccttgatgatgtctctc
cctgccttgttcaacattggtctcctgcttttcctggtcatgttcatctatgccatattt
ggaatgtccaactttgcctatgtgaagagagaagttggtattgatgacttgttcaatttt
gaaacttttggcaacagcatgctttgtcttttccaaattaccacctctgctggctgggat
ggcttgctagcgcccattctaaacagcgggcctccagattgtgaccctgagatagaccat
ccgggtagctcagtcaagggagactgtggcaatccttcggttgggattttcttctttgtc
agctacattatcatctcatttttagttgtagtgaacatgtacattgctgtcattttggag
aacttcagtgtggctaccgaagaaagtgctgaacctctgagcgaggatgattttgagatg
ttctatgaagtctgggaaaagttcgatccagatgcaacccagttcatagaatttgccaaa
ctctctgattttgcagcctctttggatcctcctcttctaataccaaaaccaaacaaagtt
cagcttattgcgatggacctgcccatggtgagtggcgatagaatccactgccttgacatc
ttatttgctttcaccaaacgtgtcttgggtgaaagcgatgaaatggacgccctccgagtg
caaatggaagaccggtttatggctgccaacccttccaaagcctcttatgaaccaattacc
accacattgaaacgaaaacaagaggaagtatccgctgttattattcagcgagcctttagg
tgctacctcttaaggctaaaagttaaaaaagtttcctgcatgtttaataaagatagaatt
aaagaaggcacagttatcaaagaagatatgatcattgataagctaaatgacaattctacc
cctgaaaaaaacgatatgaccccctccaccacctctccaccttcctacgatagcgttaca
aagcccgacaaagataaatatgagaaagacaaatcagaaaaagaagatagaggtaaagat
gtcagggactataaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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