KEGG   Thamnophis sirtalis (common garter snake): 106542120
Entry
106542120         CDS       T06107                                 
Symbol
BNIP1
Name
(RefSeq) vesicle transport protein SEC20
  KO
K08497  protein transport protein SEC20
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    106542120 (BNIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsr04131]
    106542120 (BNIP1)
Membrane trafficking [BR:tsr04131]
 SNARE
  SNAP-25[N] (Qb)
   Sec20
    106542120 (BNIP1)
SSDB
Motif
Pfam: Sec20 DUF2777 Anti-RecBCD_p2 MerR-DNA-bind V-SNARE_C
Other DBs
NCBI-GeneID: 106542120
NCBI-ProteinID: XP_013913242
UniProt: A0A6I9XH98
Position
Unknown
AA seq 228 aa
MSAAGDVPVRVCNQEIVKFDLEIKAAVQDIRDCTGPVSALAELNAKVKEKFQHVRLRIQE
LEQMAKEQDKESEKQVLLQEVENHKKQMLSNQTAWRKANLACKIAIDNSEKDELLRGGDP
LRQRKSTKESLAEGASNITESLMGISRMMSQQVQQSEETMQSLVSSSRTILDANEEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
NT seq 687 nt   +upstreamnt  +downstreamnt
atgtcggcggccggtgacgtgccggtccgggtttgcaatcaggagattgtcaaattcgac
ctggagattaaagctgccgtacaggatatccgggattgtacaggacctgtaagtgcgctt
gcagaattgaatgccaaagtaaaagaaaaattccagcatgtacgactcagaatacaagaa
cttgaacagatggctaaggagcaagataaagaatcagaaaaacaagtattactccaagaa
gtagagaaccataaaaagcaaatgctcagcaatcagactgcctggcgtaaggcaaaccta
gcttgcaaaattgcaattgacaattctgagaaagatgaattgctgcgaggaggagatcct
ttacgacaaagaaagtctactaaggaaagtctggcagagggggcaagtaacatcacagag
agcctgatgggaattagcagaatgatgtctcagcaggttcagcagagtgaggaaaccatg
caatctctagttagttcttcgcgaactatcttggatgccaatgaggagtttaagtccatg
tctggaacaattcagctggggcgaaagcttattacaaagtataaccgcagagagctgact
gataaattgctcatctttcttgcccttgccttgtttttggctactgtgctttacatcttg
aagaaaagactatttccatttttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system