KEGG   Thamnophis sirtalis (common garter snake): 106542166
Entry
106542166         CDS       T06107                                 
Symbol
SF3B5
Name
(RefSeq) splicing factor 3B subunit 5
  KO
K12832  splicing factor 3B subunit 5
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106542166 (SF3B5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsr03041]
    106542166 (SF3B5)
Spliceosome [BR:tsr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106542166 (SF3B5)
 Complex B
    106542166 (SF3B5)
 Complex C
   U2 SnRNP specific factors
    106542166 (SF3B5)
SSDB
Motif
Pfam: SF3b10 DUF2264
Other DBs
NCBI-GeneID: 106542166
NCBI-ProteinID: XP_013913291
UniProt: A0A6I9XGP2
Position
Unknown
AA seq 86 aa
MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAEDES
KARVRFNLMEKMLQPCGPPADKPDES
NT seq 261 nt   +upstreamnt  +downstreamnt
atgacggaccgttacacgattcacagccagttggagcacctgcagtccaagtacatcggg
accggccatgccgacaccaccaagtgggagtggctcgtgaaccagcaccgggactcctat
tgctcctacatgggccatttcgacctgctcaactacttcgccatcgccgaggacgaaagc
aaagcccgcgtccgtttcaacctcatggagaagatgctgcaaccctgcgggccgcccgcc
gacaagcctgacgagtcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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