KEGG   Thamnophis sirtalis (common garter snake): 106542530
Entry
106542530         CDS       T06107                                 
Symbol
SORT1
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    106542530 (SORT1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR Mo-co_dimer DUF4988
Other DBs
NCBI-GeneID: 106542530
NCBI-ProteinID: XP_013913787
UniProt: A0A6I9XIP1
Position
Unknown
AA seq 690 aa
MSFGQSKLYRSEDYGKTFTDITDLINNTFIRTEFGMAIGPENSGKVILTGDRSGPYHSGR
IFRSSDFAKNFVLTDLPFHPLTQIIYHPQSSDLLLTLSTEGSLWISKTFGEKWKEIHKDV
CLAKWGSGGTIFFTTYLNGSCKTDIGLLELKKTKDFGKTFKSIGNNIYSFGLGGRFLFAS
VMIEKTNTRRIHVSLDEGETWNMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGHGTI
YTSDDQGIIYSKSLERHLYTTTGGETDFTNITSLRGTYITSVLSEDNSIQSVITFDEGGE
WVHLRKPENAKCDSTAKNKEECNLHIHASYSISQKLNVPMAPLTEPNAVGIIISHGSVGD
AISITNPDVYISDDGGYTWSRTLEGPHHYTILDSGGIIVAVEQTPVVKEIKFSTDEGQCW
HSYVFSKEPIFFTGLASEPGAKSMNVSIWGFQESFLSRQWISYTIDFQDLLSRDCEEKDY
TKWLAHSSNPNNPTDGCILGYKEEYRRLRKSSACKNGRDYIVTKQPSVCICTLDDFLCDF
GYFRPENQSECVEQPELKGHDLEFCLYGKQELLKTSGYRKIPGDKCVGGKNPKRKETDLK
QKCTSNYLRSSPLNTSSNSTPVILAVIALMLITAVAGVVIIKKYVCGGRFLVHRYSVLQQ
HAEANGFEGLDVPGANKTGYHDDSDEDLLE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgagctttgggcaatccaaattataccgaagtgaagattatgggaaaactttcacagac
attacagacctcattaacaacactttcatcagaacagagtttggaatggctattgggcca
gagaattcagggaaggtgatactgactggtgatagatctggaccataccatagtggaaga
atcttccgatcgtctgattttgcaaagaattttgtactaacagatcttcctttccatcct
ttaacacaaataatttatcaccctcagagttctgatttgttattgaccctcagtactgag
ggtagcttgtggatatcaaagacatttggtgagaaatggaaagaaatccacaaagatgtt
tgcttggccaaatggggttctggtggaaccatcttctttactacctacctgaatggctct
tgtaaaactgatatcggattattggagttaaagaaaactaaagactttggaaagacattc
aagtccataggcaacaacatctactcctttggcctaggtggtcgctttctttttgcatct
gtgatgatagaaaaaaccaatacaaggagaatccatgtgtcactagatgaaggtgaaaca
tggaacatggctcaacttccttcagttggacaagaacaattttactctattttggcagcg
aatgatgacatggtgttcatgcatgtagatgaacctggagatactggacatggaacaatt
tatacctctgatgatcaaggtatcatatactccaagtccctggaaaggcatctctatact
accactgggggagagacagatttcaccaatataacttccctacgaggcacctatattacc
agtgtgctttcagaggataattccattcagtctgtgattacctttgatgaaggaggagaa
tgggtacacttgaggaaaccagaaaatgctaagtgtgactcaacagccaaaaataaagaa
gagtgcaaccttcacattcatgcctcctatagcatctcccagaagctgaatgtacctatg
gcacctctgactgaaccaaatgctgttggaattattatttctcatggaagtgttggagat
gctatctcaataacaaacccagatgtttacatttcggatgatggtggctacacctggtca
cggacacttgaaggtccccatcactatacaatcttggactctgggggcatcattgtggct
gttgaacaaactcctgttgtcaaagagattaagttctcaacagatgaagggcagtgctgg
cacagctatgttttcagcaaggaacccatctttttcactggtttggcatcagaacctgga
gcaaaatcaatgaatgttagcatctggggatttcaagagagcttcttatctcgccagtgg
atctcatataccattgatttccaagatcttctcagcagagactgtgaagaaaaggactat
acaaagtggttggctcattccagcaatcccaataaccccacagatggatgcatactgggc
tacaaggaggagtatagacgccttcgcaaatcctctgcttgtaaaaatggccgggactac
attgtgaccaagcagccatctgtctgcatttgcacattagatgactttctttgtgatttt
ggctatttccgcccagaaaaccagtctgaatgtgtggagcaaccagagctgaagggtcat
gacttggagttctgcttgtatgggaagcaagagctgttaaagaccagcggctatcggaag
attccaggggacaaatgtgtaggtggaaagaatcccaaacgtaaagagacagatctgaaa
caaaagtgtacaagcaactacttgagatcaagtccattgaatacctcttctaactctact
ccagtcatcctggctgtaattgccttgatgctcatcactgctgtcgctggagtagtcatc
attaagaaatacgtctgtgggggaagatttctggttcaccggtattctgtcctgcagcaa
catgcagaagcgaatggctttgaaggactggacgtacctggggccaataaaactggttac
catgacgattctgatgaggatttgttggagtag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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