KEGG T06107: 106544138

Thamnophis sirtalis (common garter snake): 106544138

Entry

106544138         CDS       T06107

Symbol

RFFL

Name

(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1

K20804

E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]

Organism

tsr Thamnophis sirtalis (common garter snake)

Brite

KEGG Orthology (KO) [BR:tsr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106544138 (RFFL)
Enzymes [BR:tsr01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     106544138 (RFFL)
Ubiquitin system [BR:tsr04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    106544138 (RFFL)

SSDB

Motif

Pfam:

FYVE_CARP1-2 ARMET_C FYVE_2 GAGBD

Other DBs

NCBI-GeneID:

106544138

NCBI-ProteinID:

XP_013915787

UniProt:

A0A6I9XP80

Position

Unknown

AA seq 399 aa
MPWLSRFLLSKVFFKPRKPASFLLLTDFLFEKFTAIMWAACCNWFCLNGQPEDMPHCPQP
GTRAYSNAGYSSFPSPTASEQSCKACGVHFSSSFLKRVCLDCKKSFCPSCSHQPESSPCL
CHLCERFRATAFQREELIKMKVKDLRDYLELREISTEMCREKDELVCLIISQQPLDPQRE
RAPQVPCPAPVSVAQEECTVTPVSQDYSPEQISTNPALQTEEHPQANGHVLPSQDDMAEV
ESAVQNLPEEETQSTDSEDNLVTGRRASLSDLTSLRDIDALSVRQLKEILARNFVNYKGC
CEKWELMERVTRLYKEKDLQQLVSDTDDQTGKHLLLCLLNIVSCNYLNRNTYCLPGKLVV
LNQCNLVSLFEPIKCMYALVFGLLKHTHTHTHTHTHSHM

NT seq 1200 nt +upstreamnt +downstreamnt
atgccttggttgtctagattcttgctttctaaggtcttcttcaagccaagaaaaccagcc
tctttccttctgttgactgactttttgtttgaaaaattcacagctatcatgtgggctgca
tgttgcaactggttttgcctgaatggacagcctgaagacatgccacattgcccgcagcca
ggaactcgagcatactccaatgctggctacagctccttcccatctcccacagcttcagag
cagagttgcaaagcctgcggggtgcattttagcagctccttccttaagcgcgtctgcctg
gactgcaagaaaagcttctgcccttcctgttcgcaccagcccgagagcagcccctgcctc
tgccacctctgtgagcgattccgagctacagcttttcagcgggaagaactcatcaaaatg
aaagtgaaggacttgcgagattatctggagctccgggagatctccacggagatgtgccgt
gaaaaagacgagctggtgtgcttgattatcagtcagcagcccttggatccccaaagggag
agggccccccaggttccttgcccagcaccagtttctgttgcccaggaggaatgtacagtg
acaccagtttcacaggattactctcccgagcaaatttccaccaaccctgccttgcagact
gaggagcatccccaggcaaatgggcatgtgctgccgagccaggacgatatggcagaagtt
gagagcgcagtgcaaaacctgcctgaggaagagacgcagtccactgattcagaagataac
ctagttacgggacggagggcatctctctctgacctaacaagcctgagagatattgatgcc
ctctcggtaaggcagttgaaagagatcctggctcgcaacttcgttaactacaaaggctgt
tgtgagaaatgggagctaatggagagagtgacccgcctttacaaagagaaggacctccag
cagctggtttcagatactgacgatcaaactggtaagcatcttcttctttgtcttctcaac
attgtaagctgcaactatttaaacaggaacacttattgtcttccaggaaaattggtagtc
ttaaatcaatgtaatttggtttctttatttgagccaataaaatgcatgtatgctttagtg
tttgggctactaaaacacacacacacacacacacacacacacacacacagtcatatgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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