KEGG   Thamnophis sirtalis (common garter snake): 106544317
Entry
106544317         CDS       T06107                                 
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
  KO
K14007  protein transport protein SEC24
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106544317 (SEC24C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsr04131]
    106544317 (SEC24C)
Membrane trafficking [BR:tsr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106544317 (SEC24C)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 106544317
NCBI-ProteinID: XP_013916038
UniProt: A0A6I9XZJ4
Position
Unknown
AA seq 1181 aa
MSVNQQAHAGPPYGQSQPGYANYMQPDYGGQQMQSVPASQYSAHNGPGTGYQQAGLPQGY
YPSLGFPSKNPPVSLDSDASFAPNFLGPVRAPPTSSGASASTSGTLIPSEQPAYSQFGQG
DVRNGISVSTVPVQRSSASQQFMAGPAPPSMAHTPAFQQYGLPPTSTQQLTSQVAEMQIG
RGSSSVPSPAGLGYGPPTSVTPASGSFTAPGSGQYMLYSGQGPPPPNISHGLPPTTLSQG
LPIAQPPISGPSALHTSAQPPLFAPPPSAAGVGISSYPAAAGISRPPTMQGALLPGQPVT
RLLTSQPNHVTSPPPQPLMTGPPPGPPVTGLQGPPPVHPSQQGYALQQNGSFGQNRGTQP
VYGAAFPGPANYGSQPAAPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVI
EDDRNNRGSEPFITGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQV
PLAAVIKPLAALPSEETPPYLVDHGESGPIRCNRCKAYMCPFMQFIEGGRRFQCCFCSCV
TEVPSHYFQHLDHTGRRVDYYDRPELSLGSYEYLATVDYCKNNKYPNPPAFIFMIDVSYN
AVRSGLVRLICEELKTLLDYLPREGTTEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVV
SDIADMFVPLLDGFLVKVNESRTVFTSLLDQIPEMFADTRETETVFAPVIQAGMEALKAA
DCAGKLFIFHTSLPIAEAPGKLKNRDDKKLVNTDKEKTLFQPQTNFYNNLAKDCVAQGCC
VDLFLFPNQYLDVATLGVVPYQTGGSVYKYTYFQVETDQERFLNDLRRDVQKEIGFDAVM
RVRTSTGIRATDFFGAFCMSNTTDVELAGLDCDKTITVEFKHDDKLREESGALLQCAVLY
TSCAGQRRLRIHNLSLSCCTQLADLYRNCETDTLINFLAKFAYRGVLNNPVKTVRDSLIN
QCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGSEVTTDDRSYIRQ
LISSMDVAETHVFFYPRLLPLTKIDYSSDSLPIAIRNSEERLSKGDIYLLENGLNIFLWV
GVNVQQGLIQNLFGVSSFSQINSSMCTLPVLDNPFSKRVRSTIDLFQAQRSRYMKFIIVK
QEDKLDLLFKHFLVEDKSMNGGASYVDFLCHMHKEIRQLLS
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgagtgtcaaccagcaagctcacgcagggcctccttatgggcaatcacagcctggatat
gcaaattacatgcagcctgactatggaggacagcaaatgcaaagtgttcctgcctctcag
tacagtgctcacaatggcccagggacaggataccaacaagcaggccttccccaaggttac
tatccttccttggggtttccttctaagaatcctcctgtctctcttgattctgatgcttcc
tttgctcctaacttcctaggtcctgtaagagctcctcccacctcatctggagcatctgca
tcgacatctggaacattaatcccttctgaacaacctgcctatagtcagtttggacaagga
gatgtacgaaatgggatatctgtttctacagttcccgtgcaaagatcatctgcttctcaa
cagttcatggcgggcccagcacctccttcaatggctcacactcctgctttccagcaatat
ggactgcctccaactagcacccaacagctgactagtcaggtggcagaaatgcagataggc
agaggatcctcctctgtcccatccccagctggactgggctatggtcctccaacatcggtt
acaccagcctcaggaagttttactgcacctggatctgggcaatatatgttatattcaggc
caaggaccaccacctcccaatatatctcatggattgcctcctaccaccttgtctcagggt
cttccaatagctcagccacctatatcgggtccatcagccctgcatacgtctgctcaacct
cccctatttgctcccccaccttcagctgctggggttggaatatccagttatcctgctgct
gcggggatttcaaggcctcccacaatgcagggtgcattgttgcctggacaaccagttact
agactgctcacttcccagccaaatcatgtgacttcaccaccacctcagccacttatgaca
ggaccacctcctgggccaccagtaacaggattgcagggaccacctcctgtccatccttca
caacaaggatatgcactgcagcaaaatggttcttttgggcaaaatagaggaactcaacca
gtgtatggtgcagctttccctggaccagcaaattatgggagtcagcctgcagcaccacct
ccgcccaaacgacttgacccggactccattcctagccctcaactcaatgagctgccacct
cagcagaaacccaggcacagaatagatcctgatgcaattcctagcccaattcaggttatt
gaagatgacagaaataaccgtgggtcagagccattcatcacaggagtacgtgggcaagtc
ccacctcttgtcactacaaatttcttggtgaaagatcaaggtaatgcaagtccccgctac
ataagatgtacttcttataatattccctgcacttctgatatggctaaacaatctcaagtt
cctcttgctgcagtcataaaaccgttggctgcacttccctcagaagagacccctccttat
ttggtggaccatggagaatcaggtcccattcggtgcaataggtgcaaggcgtacatgtgc
ccttttatgcagttcattgagggaggaagacgattccagtgttgcttctgtagctgtgtt
actgaagtgccatctcattacttccagcatttggatcacacaggcaggcgagtggactac
tatgacagacctgaattatcactgggctcctatgaatatctagctactgttgactactgc
aagaataataagtatcccaaccctcctgcttttattttcatgattgatgtgtcatacaac
gcagtacgtagtggcttggtcagactgatatgtgaagaactgaagactctcctggattac
ctcccgagagaaggaactacagaagaatcagccatccgggtgggttttgtcacctacaat
aaagttctacatttctataatgtcaagagctcccttgcacagccgcaaatgatggttgtt
tcggatatagcagatatgtttgtacctttgcttgatggctttcttgtgaaagtgaatgag
tctcgcacagtttttaccagcctgttggatcaaatcccagaaatgtttgctgatacaaga
gaaacagaaacagtctttgctccagtgattcaggctggcatggaagctctaaaggctgca
gactgtgctggcaagcttttcatatttcacacatcgctgcctatagcagaggctccagga
aagctgaagaacagagatgacaagaaactggtgaacactgataaagaaaagactctgttt
cagcctcaaacaaatttctacaacaacttagccaaggattgtgtagcccaaggctgctgt
gtggaccttttccttttcccaaatcagtatttggatgtagctaccttgggggttgttccg
tatcagactggtggctctgtttataaatacacatattttcaggtggaaacagatcaggaa
cgcttcttgaatgatttacgtagagatgttcaaaaagaaattggatttgatgctgtgatg
agagtacgtactagcacaggtattagagcaacagacttctttggtgctttctgtatgagc
aatacaacagatgtggaattggcaggcttagactgtgacaaaacaatcactgtggaattt
aaacatgatgacaagctaagagaagagagtggggccttgcttcagtgtgctgtattatat
accagttgtgcaggacagaggcgtctgcgcattcacaatctctccctgagctgctgcaca
cagctggctgatctttataggaactgtgagacagacacacttatcaactttttggctaaa
tttgcatatcgtggagtactgaacaacccagtcaaaaccgtgagagattcattgatcaat
cagtgtgcccagatcttagcatgctatcgaaaaaactgtgctagcccttcttctgctgga
cagctgattcttcctgaatgcatgaaactgctccctgtgtatttgaactgtgttttgaaa
agtgatgtgctccagcctgggtccgaggtcaccactgatgatcgctcctacatccgccag
ctaatcagctctatggatgttgcagaaactcatgttttcttttatcctagactgttacca
ctgaccaaaatagattacagcagtgactccttaccaatagcaatcagaaactcagaagaa
cgtctctccaagggtgacatatacctactagaaaatggcctgaatatatttttgtgggta
ggagtaaacgttcaacaagggctgatccaaaacctctttggagtctcatctttcagccag
atcaacagctctatgtgcacactaccagttttggacaatcccttttcaaaaagagtgcga
tccactattgatttattccaggctcaaagatcacgctacatgaagtttatcattgtgaag
caggaagacaaactggatctgctgttcaaacacttcttggtggaagataagagcatgaat
gggggggcttcatatgtggacttcctctgtcacatgcacaaagaaattcgccagttgctg
agctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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