KEGG   Thamnophis sirtalis (common garter snake): 106546601
Entry
106546601         CDS       T06107                                 
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04145  Phagosome
tsr04210  Apoptosis
tsr04530  Tight junction
tsr04540  Gap junction
tsr04814  Motor proteins
tsr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106546601
  09143 Cell growth and death
   04210 Apoptosis
    106546601
  09144 Cellular community - eukaryotes
   04530 Tight junction
    106546601
   04540 Gap junction
    106546601
  09142 Cell motility
   04814 Motor proteins
    106546601
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106546601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106546601
   03036 Chromosome and associated proteins [BR:tsr03036]
    106546601
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tsr04812]
    106546601
   04147 Exosome [BR:tsr04147]
    106546601
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106546601
Chromosome and associated proteins [BR:tsr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     106546601
Cytoskeleton proteins [BR:tsr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    106546601
Exosome [BR:tsr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106546601
  Exosomal proteins of other body fluids (saliva and urine)
   106546601
  Exosomal proteins of colorectal cancer cells
   106546601
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 106546601
NCBI-ProteinID: XP_013918982
UniProt: A0A6I9XXT4
Position
Unknown
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
TVEPYNPILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSADGDDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccgtccacgttggccaagccggggtccagattggcaatgcctgc
tgggagctctactgcctagaacatggcatccagccagatgggcagatgcccagcgataag
accattgggggaggagatgactccttcaacaccttcttcagtgagactggagctggcaaa
cacgttcccagggctgtgtttgtggatttggagccaacagtgattgatgaagtgcgcact
ggaacataccgccagctattccaccctgagcaactgatcactggcaaagaagatgctgct
aacaactatgccagggggcattacaccattggcaaagagatcattgacttggtccttgac
aggattaggaaattggccgaccagtgcacaggtctccagggttttctggtcttccacagc
tttggtggtggcactggctctggctttacatccttgctgatggagcgcctgtccgttgac
tatggcaagaagtccaagctggagttctccatctacccagctccccaagtatccacagct
accgttgagccctacaaccccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtagacaacgaagccatctatgacatttgccgacgaaaccttgacattgag
cgtcccacctacaccaacctcaatcgccttatcagccagatcgtgtcctccatcacagct
tccctgcgatttgatggtgccctgaatgtagatctgacagaattccagaccaacttggtg
ccctaccctagaatccatttccctctggcgacctatgctccagtcatctctgctgaaaaa
gcctaccatgagcagctttctgtagcagagatcactaatgcatgctttgagccagctaat
cagatggtgaaatgtgaccctcgtcatggtaaatacatggcctgctgcctgttgtaccgt
ggtgacgttgttcccaaagatgtcaatgctgctattgccactatcaagaccaaacgcagc
atccagtttgtagactggtgtcccactggtttcaaggttggtatcaactaccagcccccg
accgtggtccccggaggcgacttggccaaagtgcagcgtgcagtctgcatgctgagcaac
accacagccattgctgaggcctgggcccgcctggaccataagtttgacctgatgtatgcc
aagcgtgcctttgtccactggtatgttggggaagggatggaagaaggggagttctcagag
gctagggaggacatggctgctctggagaaggattatgaagaggtaggggccgatagtgct
gatggggatgatgagggagaagaatactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system