KEGG   Thamnophis sirtalis (common garter snake): 106547348
Entry
106547348         CDS       T06107                                 
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
  KO
K04344  voltage-dependent calcium channel P/Q type alpha-1A
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04010  MAPK signaling pathway
tsr04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    106547348 (CACNA1A)
   04020 Calcium signaling pathway
    106547348 (CACNA1A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:tsr04040]
    106547348 (CACNA1A)
Ion channels [BR:tsr04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   106547348 (CACNA1A)
SSDB
Motif
Pfam: Ion_trans PKD_channel GPHH
Other DBs
NCBI-GeneID: 106547348
NCBI-ProteinID: XP_013919992
UniProt: A0A6I9XZW2
Position
Unknown
AA seq 1798 aa
MQFAMIVAKIMYSNCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGF
AFHKGSYLRNGWNVMDFVVVLTGILSTVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLK
SIMKAMIPLLQIGLLLFFAILIFAIIGLEFYLGKFHTACKDIHTDEIMQEAPCGKESPSR
LCPNGTECKEYWQGPNYGITQFDNILFAVLTVFQCITMEGWTNLLYYSNDASGSAWNWLY
FIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKA
EVILAEDDIEGEPRHPFDGALRRATIKKSKTDLLNPEEADDPLADISSVGSPFARASIKS
VTLENATFFHKKERRLRFYIRRIVKTQAFYWTVLSLVALNTLCVAIVHYNQPDWLSDFLY
YAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAAIKPGTSFGIS
VLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQF
NFDDGTPPTNFDTFPAAIMTVFQILTGEDWNEVMYHGIQSQGGVDKGMMFSIYFIVLTLF
GNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSATNMSIA
MKEQQKNQKGNKSVWEQRTTEMRKQNLLASREALYNEMDPEDHWKVAYARQMRPDMKTHL
DRPLVVDPQENRNNNTNKTRPNEPPLNPHFGQQRSVEFLRKPPRYHAHSREPHLYERPDS
GSLEPRHPRSNSKEIDFNQESRCHDIDYPSQERSVIPEQGYHGDCASERIKNIDPHRWRQ
GSKESQSGSPRTVDGEREHRRHRTHRRTPDDGNGEQSGRVERRPRHREGSRPVRTDMGGE
HPDGERRRRHRHAGQSTYEVDGKERRHRRRKENQGSGHPPGPNLSTTRPIQQDMGRLEPP
VSEDIDNMKNNKLATNETSNQHLISHSQNDPIKGGNHSNSTPHCTSQNQPIPLDQPFLNS
QNSTSRQTPSNPANPASPGAPKNPENSLIVTNPTTQNNPPKTAKKSEYTAVEIPPAFPPP
INNAIMQVNKNANPEPLPKKEEEKKEEDDDEGGEDGPKPMPPYSSMFILSTTNPFRRLCH
YIVNLRYFEICILMVIAMSSIALAAEDPVQPSAPRNNVLRYFDYVFTGVFTFEMVVKMID
LGLILHRGAYFRDLWNILDFIVVSGALVAFAFTSSSRGSKGKDINTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFEK
DCRGEYLVYEKNNEVKAERREWRKYDFHYDNVLWALLTLFTVSTGEGWPDVLKHSVDATY
ENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERAC
IDFAISAKPLTRHMPQNKQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYNATNLY
DNLLRMFNIVFTALFSLECILKIIAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGNNF
INLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVF
GNISIKHDEDISEDDLPAITEHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKLCDEK
ADLKGYQCGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVR
VWAEYDPAAWAGRGHSHRAHFFELNEWRLLRATAWKKANIPSLRAAFHFGSKTFWVDV
NT seq 5397 nt   +upstreamnt  +downstreamnt
atgcagtttgctatgatagttgctaaaatcatgtattcaaactgcattgtccttgctctg
gagcaacatctacctgatggagacaagacaccaatgtcggaacgattggatgacactgaa
ccatacttcattggaatattttgttttgaggctggaattaaaattattgccttaggattt
gctttccacaagggatcctacctaaggaatgggtggaatgtgatggattttgtggtggtt
ctcacaggcatcttgtcaacagttggtactgaatttgacttgcgaactttgcgggcagtt
cgtgtactccggccgctaaagttagtgtcaggaatcccaagtttacaagttgtccttaaa
tccataatgaaggccatgatacctctgctacaaattggcctcctcctattttttgcaatc
cttatttttgcaatcatagggttagaattttatttggggaaatttcacaccgcctgcaag
gatattcatacagatgaaatcatgcaagaagctccatgtgggaaggaatcaccgtcacgc
ctctgccctaatgggactgagtgtaaagaatactggcaaggacccaactacgggatcaca
cagtttgataacatcctcttcgctgtgctgactgtcttccagtgtatcaccatggaaggg
tggactaacctcctctattatagcaatgatgcctcagggagtgcttggaactggctatac
ttcatccctctcatcatcattggatccttttttatgctcaaccttgtgctaggggtgctt
tctggggagtttgccaaagaaagggagcgagtagaaaatcggcgtgcatttctgaagctg
agaagacaacagcaaattgaacgggagctcaatggctatatggagtggatctccaaagca
gaagtcatcctggctgaagatgacatagaaggagagcctcgtcatcccttcgatggagct
cttcggagggccaccatcaagaaaagcaaaacagacttgctgaacccagaggaagctgat
gacccactggcagacatctcttcagtaggttcaccttttgctcgagccagcatcaaaagt
gtcacgctggaaaatgctactttctttcacaaaaaagagcggaggttgcgtttctatatc
cgtcgtattgtcaaaactcaggccttttactggacagtcctcagtctggtagctctcaac
actttgtgtgttgctatagtacattacaaccagccagattggctatctgacttcctctac
tatgcagaattcattttcttagggctctttatgtccgaaatgtttataaaaatgtatggg
cttggaacgcggccttactttcattcatctttcaactgctttgattgtgctgttatcatt
gggagcatcttcgaggtcatttgggctgcaataaagcctggcacctcctttgggataagc
gtcttacgagctctcaggttactgcgtattttcaaagtcacaaagtactgggcttcccta
cgaaacctagttgtatctctgctgaactccatgaagtccatcatcagccttcttttcctc
cttttcctcttcatagtcgtttttgcccttttgggaatgcaactctttgggggccagttc
aattttgatgatggaaccccaccaaccaattttgacacttttccagcagcaataatgaca
gtatttcagattctgactggtgaagactggaatgaagtgatgtatcatggtatccaatct
cagggcggtgttgataaaggaatgatgttttcaatctatttcatagtcctgaccttgttt
ggtaactacactttgctcaatgtgttcttggctattgcggtggataatttggccaatgca
caagagctcaccaaggatgaacaagaagaagaagaagcagctaaccagaaacttgccctc
cagaaggcgaaggaggtagcagaagtgagtcctctttctgcaaccaacatgtcaatagca
atgaaagagcagcaaaagaatcaaaaaggcaacaaatctgtttgggaacagcggacaact
gaaatgcggaagcagaatttgctggcaagtagagaggccctatacaatgagatggatcct
gaggatcattggaaagttgcatatgcccggcaaatgcgtccagacatgaaaactcactta
gacagaccactggtggtagatcctcaagaaaatcggaataacaacaccaataagacacgt
cccaatgagccacccttgaatccccactttgggcaacaacggtctgtggaattcctacga
aaaccaccccgttaccatgcacattcacgagaaccccacctgtatgagcgtcccgactca
ggaagcttggagcctcgacacccaaggagcaatagcaaggaaattgactttaatcaagaa
agtagatgtcatgatattgattatcccagccaggagcgtagtgtcattccagagcagggt
tatcatggtgactgtgcctcagagcgcatcaaaaatatagatccccatcgctggcgccaa
ggtagcaaagaaagtcagagtggatcacctcgtacggtagatggtgaacgggagcaccgg
cggcatagaacacaccgccgaacaccagatgatggaaatggtgaacagagtggcagagtt
gaacgtcgccctcggcatcgtgaggggagcagacctgtacgaactgacatgggtggggaa
catcctgatggagaaaggcgccgacggcaccggcatgctggacagtccacttatgaagtc
gatggcaaggaacgccgacaccgacgcaggaaagaaaaccaaggatctggtcatccacca
ggaccaaacctatctaccacaaggccaattcagcaagatatgggacgtttagaacctcca
gtatctgaggatattgacaacatgaagaataataaattggcaaccaatgaaacctcaaac
caacatctcatcagtcattctcagaatgatcctatcaaaggaggaaaccactcaaattcc
acaccacactgcacatcccaaaatcaacctattcctttggaccaaccatttctcaactct
cagaattctaccagtcgccaaacccccagtaaccctgccaatccagccagtcctggagct
cctaaaaatccagagaacagccttattgtcactaatcccacaacccaaaacaatccaccc
aaaactgccaagaaatcagaatacacagcagtggagattccacctgccttcccacctcca
atcaataatgctataatgcaagtcaataagaatgccaatccagagcctctgccaaagaaa
gaggaagagaaaaaagaggaagatgatgatgagggaggtgaagatgggcccaagcctatg
ccaccatacagttctatgttcatcctctcaaccactaatccttttcggcgcctctgtcat
tacattgtcaatctgcgctactttgagatctgcattctgatggtgattgccatgagcagc
attgcattggctgctgaagatcctgtacagccgagtgctcctcgtaacaatgttcttcgt
tactttgattatgtcttcacaggtgtcttcacctttgaaatggttgttaagatgattgac
ttaggactgatacttcatcggggcgcttattttcgggatctgtggaacatcctggatttc
attgtggtcagtggagcattggtggcatttgccttcacgagcagctcacgaggcagtaaa
ggaaaagacatcaacaccattaaatccttacgtgtccttcgtgtcctcagacccctcaaa
actatcaagcggttgccaaagctcaaggctgtctttgactgtgtggtgaactcactcaaa
aatgtcctcaatattctcattgtatacatgctcttcatgttcatcttcgctgtggttgct
gtccagctctttaagggcaggttcttctactgcactgatgaatccaaggagtttgaaaag
gactgcagaggagaatatttagtctacgagaagaacaatgaagtgaaggctgagagacga
gagtggaggaaatatgatttccattatgacaatgtactatgggcactgcttacccttttc
actgtgtctacaggagaaggttggccagatgttcttaagcactcagtggatgctacatat
gagaatcaggggcccagcccaggttatcgcatggagatgtccatcttctatgtggtttat
tttgtggtcttcccattttttttcgtcaacatttttgtggccttaatcatcatcactttc
caagagcaaggggacaagatgatggaggaatacagtctggagaagaatgagcgagcctgc
attgattttgctatcagcgccaagccactaacccgacacatgcctcaaaacaagcagagc
tttcagtaccgtatgtggcagtttgtggtttcccctccttttgaatacaccattatggcc
atgattgccctaaacaccattgtcttaatgatgaaattctacaatgcaacaaatctttac
gataatttattaaggatgttcaacattgtcttcactgccctgttttccttggaatgtatt
ctgaaaatcattgcctttggagtgctgaattatttccgtgatgcctggaatatctttgat
tttgtcacagttctgggtagcatcacagacatcttagtgacagagtttgggaacaacttc
atcaacctgagttttcttaggctgtttcgagctgcccgtctcattaagttgctccgacaa
ggctataccatccgcattctgctctggacctttgtccaatcttttaaggcccttccatat
gtgtgtttgctgattgcaatgctgttttttatctacgccattataggaatgcaggttttt
ggcaatattagcattaaacatgatgaggatatatctgaggatgacttgcctgccatcact
gagcacaataattttcgcacattctttcaagctttgatgcttctttttagaagtgccaca
ggtgaggcttggcatgagatcatgctctcttgtctaagtggaaaactctgtgatgaaaaa
gcagatctcaaaggatatcagtgtggcaatgagtttgcatacttctattttgtttccttc
attttcctgtgttctttcctgatgttgaaccttttcgtggctgtcatcatggataatttt
gaatatctgacccgcgactcctccattttggggccccaccatctggatgagtatgttcgt
gtgtgggctgagtatgaccctgctgcctgggcagggcggggacacagtcaccgagcccat
ttcttcgaactcaacgaatggaggcttctgagggcaacagcttggaagaaggccaacatt
ccatccctcagggcagctttccattttggctccaagaccttctgggtggatgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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