KEGG   Thamnophis sirtalis (common garter snake): 106547977
Entry
106547977         CDS       T06107                                 
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
  KO
K10602  E3 ubiquitin-protein ligase NHLRC1 [EC:2.3.2.27]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106547977 (NHLRC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106547977 (NHLRC1)
Enzymes [BR:tsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106547977 (NHLRC1)
Ubiquitin system [BR:tsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106547977 (NHLRC1)
SSDB
Motif
Pfam: NHL zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4 Baculo_IE-1 zf-C3HC4_4 zf-C3HC4_2 Prok-RING_4 zf-RING_4 zf-RING_11 zf-ANAPC11
Other DBs
NCBI-GeneID: 106547977
NCBI-ProteinID: XP_013920737
UniProt: A0A6I9Y1F5
Position
Unknown
AA seq 400 aa
MTAKAADQTEIMTELLDQSENNLLECKVCFENFNPEKKHRPKNLPCGHVMCLECVMSLAH
PRNSRLECPFCRRACKASETSDCLPLLHLMEILNPSANRTPVVGKTVGRKEAVAAPGSQL
FTFHLSFGGWGTLINPTGLAVCQSSSCLAVAHDGKKRIKLFSFSGSCIQQFGERGQSGND
LRYPTDVAVTLDGHIVVTDSGDRSVKVFDCDGRGKMVIAESFSLPWGLDTLPQDDILMTD
SEAGALYRLSADFKNGELKGVKKLYSNLCYPRKVAASPVSGAIAVIEHLMARGPCYGNTR
LKIFNRDLQLIGQVDSFGLSLVFPSKVHASAVTFSREGQVIVTDAYNQAVFSLGKPEEFP
MCTPLITQGLSYPLALTFISDNSLVILDGGDHSLKIYALS
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgactgccaaagccgctgatcaaacagaaatcatgacagagctgctggatcagtctgag
aacaatctgctcgaatgcaaagtatgcttcgaaaattttaaccccgagaaaaagcatcgg
ccgaagaacttgccatgcgggcatgtgatgtgcctggagtgtgtcatgtctctggcccac
cctcggaattccaggctggagtgccctttctgtcgaagggcttgcaaagcttcagagact
agcgactgcttgccgttgttgcacctgatggaaatcttgaatccttcagccaaccggact
ccggttgttgggaagacagtagggagaaaggaggctgtggctgcccctggatctcagctc
ttcacctttcacctttctttcggaggctgggggacgctgatcaaccccacggggctggct
gtgtgtcagagctccagctgtttagccgtggcccacgatggcaagaagcgaatcaagctg
ttcagcttcagtggcagctgcatacagcagtttggagaaagagggcaatccggaaatgac
ctcaggtacccgactgatgtcgcagtcacgctggacggtcacattgtggtcacagatagc
ggggatcgttcggtcaaagtgttcgattgtgacggcagaggcaaaatggtcatcgcggag
tccttttccttgccgtggggccttgacaccctgccccaagacgacatcctcatgaccgat
tcggaggcaggtgctctgtaccgcttgtcggctgactttaaaaatggagaattaaaggga
gtgaagaagttgtattctaacctgtgttatccgaggaaagtggctgcttcgcccgtctct
ggagccatcgctgtcatcgaacacttgatggccagagggccctgctacggcaataccagg
ctgaaaatcttcaacagagacttgcaactaatcggtcaggtggacagttttggcctgagt
cttgtcttcccttccaaagtccacgccagtgctgtgacctttagcagggaagggcaagta
atagtaacggatgcttataaccaagccgttttctctcttggaaaacccgaagaattccct
atgtgtacaccactgataactcagggactttcctaccctttggcattaactttcatatca
gataattctctagtcattttagacgggggcgatcattctttaaaaatatatgctctcagc
taa

DBGET integrated database retrieval system