KEGG   Thamnophis sirtalis (common garter snake): 106548190
Entry
106548190         CDS       T06107                                 
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein isoform X1
  KO
K12385  Niemann-Pick C1 protein
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03265  Virion - Ebolavirus and Lyssavirus
tsr04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    106548190 (NPC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    106548190 (NPC1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tsr02000]
    106548190 (NPC1)
Transporters [BR:tsr02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   106548190 (NPC1)
SSDB
Motif
Pfam: Patched NPC1_N Sterol-sensing MMPL ACR_tran
Other DBs
NCBI-GeneID: 106548190
NCBI-ProteinID: XP_013920997
UniProt: A0A6I9Y1Y5
Position
Unknown
AA seq 1291 aa
MRDQLRLRGRSCGRLCGLAVSVVLLLALLPGRAFSGSCIWYGECEISSGDKRYNCQYNGS
AIPLPKDGYDLVQELCPGFFFENVSLCCDVQQLKTLKSNLELPLQFLSRCPSCFHNLMNL
FCELTCGPHQSEFLNITQTKPYQDPVTKENKTNIIELQYYIGKIFANDMYNACKDVEAPS
SNIKALGLLCGKDVKDCNATNWIQYMFSKDNGQAPFNMIPIFSDVPIHGMIPMNNATKGC
NESMDDITGPCSCQDCSIVCGPKPEPPPPPAPWLLLGLDAMCVIMWISYTAFLLIFFAVV
CGIWCYRKRYFVSEYTPIDGNIAYSVNSHQNTGEVTWCERFGEKFENILRVTFTSWGAFC
VRNPRPVILFSLIIIAMCSSGLAFLKITTNPVDLWSAPNSQARREKEYFDNNFGPFFRTE
QIIIQAVNTTPEMYKPYLPGPDVPFGPPLTKHILHQILDLQNGVENLTASYQNETVMLKD
ICLAPLAPYNNNCTILSVLNYFQNSHSRLDANISDEFYTYADFHSHFLYCVRAPASLNDT
GLLHEPCLGTFGGPVFPWLVMGGYDNENYNNATALVITFPVINYQNGTEKMMKVLAWEKE
FINFVKNYNNPNLRISYSAERSIEDEINRESNSDVHTIVISYAVMFVYISIALGHIKSVA
RVLVDSKISLGIAGILIVLSSVACSLGIFSYCGVPLTLIVIEVIPFLVLAVGVDNIFIIV
QTFQRDERLQDETLDKQIGRILGEVAPSMLLSSFSEAVAFFLGSLSTMPAVRTFSLFAAV
AVFIDFLLQITCFVSLLGLDVKRQESNRCDILCCIKGHEEISSFHHSKSMLFQFFKNIYS
PFLLKEWMRPIIISIFVGVLSFSIAVVNKVEIGLDQRLSMPDDSYLIVYFNDLGKYLHAG
PPVYFVLKEGHDYTTPDGQNMVCGGMGCDNNSLVQQVFDAAEISSYTRIGYSPSSWIDDY
FDWIKPQSSCCRTYNTTGAFCNASVINPSCVRCRPMTKEGKQRPEGEDFMKFLPMFLSDN
PNPKCGKGGHAAYSSAVNFIHNSSEIGATYFMTYHTVLKTSADFIDALKKARIITNNITA
AMVHKEKNAEVFPYSLFYVFYEQYLTIVDDTIFNLGISLGSIFIVTMVLLGFEIWAAVIV
SLTIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTISTKATRVERA
EEALSQMGSCVFSGITLTKFGGIVVLAFSKSQIFQVFYFRMYLAMVLLGATHGLIFLPVL
LSYIGPSINKAKVRAAQERNKGTEREKLLFF
NT seq 3876 nt   +upstreamnt  +downstreamnt
atgcgcgatcagcttaggctacggggccgcagctgtgggaggctctgcggcctggccgtc
tctgtcgtcttgttactggcgcttctgcccggccgggcattctcaggctcttgcatatgg
tatggcgaatgtgaaatttcttctggagacaaaaggtataactgtcaatataatggttca
gcaataccactaccaaaggatgggtatgatttagtgcaggaactctgtccaggttttttc
tttgagaatgttagcctttgctgtgacgtacagcaacttaagactttgaaaagtaatctg
gagctacctttacagtttctttccaggtgtccatcatgctttcataatttaatgaatctg
ttttgtgagctaacctgtggccctcaccagtctgaatttttgaatattactcaaacaaag
ccatatcaagatccagttacaaaagagaacaaaaccaacatcatagagctgcaatattat
attggaaaaatttttgctaatgatatgtataatgcctgcaaagatgtggaggctccatca
agcaatattaaggcattaggtctgttgtgtgggaaagatgttaaagactgtaatgcaacc
aattggattcagtatatgtttagcaaagataatggccaggctcccttcaacatgattcca
atattttcagatgtacctatccatgggatgattcctatgaacaatgctaccaaaggctgc
aatgagtctatggatgatatcacaggaccttgtagttgtcaagattgttccattgtctgt
ggcccaaaaccagaaccaccaccacctcctgccccatggcttttgcttggtttagatgcc
atgtgtgttattatgtggatctcctacacagcatttcttcttattttctttgcagtggtt
tgtggcatctggtgttacaggaagagatattttgtttctgaatatacacccattgatggc
aatattgcatattctgttaactcacatcaaaatactggagaagttacttggtgtgaaaga
tttggtgagaaatttgagaatattttaagagttacatttacgtcatggggagctttttgt
gttcggaatccacgacctgttattctgttctccttgattatcattgccatgtgttcctca
ggcttggcatttctcaaaataactacaaatcctgtagatctgtggtcagccccaaatagc
caagcccggagagagaaggaatactttgataataattttggacctttcttccgtactgaa
caaatcattattcaggcagtaaataccactccagagatgtataagccatatcttccagga
ccagatgttccttttggacctccacttacaaaacatatcttgcatcagatactagatttg
caaaatggtgttgaaaacttaactgcatcttatcaaaatgaaactgtaatgttgaaagac
atttgcctggcacctcttgctccctacaataacaactgtactattctgagtgttctcaac
tacttccagaacagtcattctaggctagatgctaacatttctgatgaattctatacctat
gctgacttccactctcacttcttatactgtgtcagggctccagcatctctgaatgacaca
ggtctccttcatgaaccttgcttggggacatttggtggtcctgtcttcccatggctggtg
atgggaggatatgataatgaaaattataataatgccacagcacttgtgatcacatttcct
gtcataaattaccagaatggcacagaaaagatgatgaaagttttggcttgggaaaaggag
tttatcaattttgtgaaaaactataacaacccaaatttaagaatttcctactctgcagaa
cgtagtattgaagatgaaataaatcgagaaagcaacagtgatgttcatactattgtaatt
agctatgcagtcatgtttgtgtacatttccatagctcttggacatattaagagtgttgct
agagtcttggtggattcaaagatctcattgggtattgcaggcatcctgatagtgctaagt
tcagttgcatgttctttgggtatcttcagctattgtggagtccctctcacactaattgtt
attgaagtcattccctttttggtgttggctgttggagtggacaacattttcattattgtt
cagacatttcagagagatgaaaggcttcaagatgaaaccttagataagcagattggtcga
atccttggggaggtggctcctagtatgcttctttcctcattttctgaggctgtggctttt
ttcttagggagcttgtctactatgcctgcagttcgtacattctccctctttgctgctgtg
gctgtctttattgatttccttctgcaaattacttgctttgtaagtctcttgggcttggat
gttaagcgccaagagagtaatcgatgtgatatcctgtgctgtatcaaaggtcatgaagaa
atcagtagtttccatcattctaaaagcatgttgtttcaatttttcaaaaacatttattct
ccgtttcttcttaaagagtggatgagaccaattattatatctatatttgtgggtgtgtta
tcattcagcatagcagttgtcaacaaagttgagattggcctggaccagagattatcaatg
cctgatgattcctatttgatagtctacttcaatgatcttggcaaatacctgcacgcaggt
cctccagtatattttgtgttgaaagaaggccatgattatacaacgccagatggacaaaat
atggtctgtggaggaatgggatgtgacaacaattctctggtacagcaagtgtttgatgca
gcagagattagcagctatacaagaattggttattcaccttcttcctggattgatgactac
tttgactggatcaagccacaatcttcctgttgcagaacttataacaccactggagcattc
tgcaatgcttcagttatcaatccatcatgtgtgcgctgcaggccaatgactaaagaagga
aaacagagacctgagggtgaagacttcatgaaatttctccctatgttcctctcggataat
cctaatccgaaatgtggcaagggaggacacgctgcatatagttctgcagtcaactttata
cacaactcttctgaaattggagccacttacttcatgacttaccatacagtgctaaaaact
tcagcagactttattgatgcattgaaaaaagcacggattataacgaacaatattactgca
gccatggtccacaaagaaaaaaatgctgaagtttttccttacagcttgttctatgttttt
tatgaacaatatttaacaattgtggatgacaccatctttaatcttggcatttcccttgga
tcaatattcatagtaactatggtgctgcttggttttgaaatatgggctgccgttattgtt
tccctcactattgctatgatactggtcaacatgtttggagtgatgtggctctggggtatc
agtttaaatgcagtttccttagtaaaccttgtaatgagttgcggcatcgctgttgagttt
tgtagccatgtgacaagagcattcacaattagtacaaaagcaacaagagtagagcgtgct
gaagaagcactatcccaaatggggagctgtgttttcagtggtattacacttacaaaattt
ggaggaatagtggtgcttgctttttccaaatctcagattttccaagtcttctacttcagg
atgtatttagccatggtgctacttggagcaacccatggtctaatatttcttcctgtccta
cttagctacatagggccctcaataaataaagctaaagttcgtgcagcacaagaaaggaac
aaaggtacagaaagagaaaaactcctgttcttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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