KEGG   Thamnophis sirtalis (common garter snake): 106550232
Entry
106550232         CDS       T06107                                 
Symbol
VIPAS39
Name
(RefSeq) spermatogenesis-defective protein 39 homolog
  KO
K23287  VPS33B-interacting protein in polarity and apical restriction
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsr04131]
    106550232 (VIPAS39)
Membrane trafficking [BR:tsr04131]
 Endosome - Lysosome transport
  Others
   Others
    106550232 (VIPAS39)
SSDB
Motif
Pfam: Vps16_C
Other DBs
NCBI-GeneID: 106550232
NCBI-ProteinID: XP_013923574
UniProt: A0A6I9YHY1
Position
Unknown
AA seq 386 aa
MSKMKVDEEEYWNSSKCKAFTFDDEDDELLQLKESKRTVNSLPDITDDDDDDLEKFNWSG
EPVGSISWSIKETASSSSSSSTSEGRDLNQQKGSSYAAIPKQSSSYLLSSFFKGRTKHGS
FHSLSDALTDTGFKHYAPELRRPKGDYKDYNSDWSPNDTVRRLQRGKVCSLERFHSLQDK
LLLLDEAVALHDGNVITAILIFLKRTLRKEILFRELEMRQVALRHLIHFLKEAGDQKLLL
DLLRFLGRTEEVALTQYREHLTISDAEKRREFLKSCIGLPFSSEDAAHVQDHYTLLERQI
IIEANDKHLESSGQTEIFRKHPRKASILNMPLVTTLFYSCFYHYTETEGTFSSPANLKKT
FKIPDKQYVLTALAARAKLRAWHDVD
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgagcaagatgaaggttgatgaagaagaatattggaacagttccaaatgtaaggccttt
acttttgatgatgaagatgatgaactgcttcagttgaaggaatccaagagaactgtcaat
agccttccagatattacagatgatgatgatgatgaccttgagaagttcaactggagtggg
gaacctgtgggcagcatttcttggtcaattaaagaaactgcctctagcagcagtagcagc
agtacctctgaaggaagggatctgaatcagcaaaagggctcttcttatgcagctataccc
aagcaatcttcttcatacctactgagcagcttttttaaaggaagaactaagcatgggagt
ttccattcactttcagatgctcttacagacacaggatttaaacattatgctccagaatta
cgcagaccaaaaggagattataaggattacaattctgattggagccccaacgatacagta
agacggctgcagagaggcaaggtgtgttccttggaaaggttccattccttgcaggacaaa
ttattgctgctggatgaagctgttgcgttgcatgatgggaatgttattacagctatactc
atttttctgaaaagaaccttaaggaaagagatcctgttcagagagctggagatgcggcaa
gttgctttgcgccatttaatacattttctcaaggaggctggagaccaaaaacttctccta
gacctgttgagattcctgggcaggactgaagaagttgccctgacccaataccgtgaacat
ttgactatctcggatgctgagaaaagaagggagtttctgaaaagttgcattgggttgccc
ttttcatcagaggatgctgctcatgttcaggatcattatacactcttggagagacagatt
atcattgaggcaaatgacaaacatttagaatcatctgggcagacggaaatctttcgaaaa
caccctagaaaagcttccattctaaacatgccattagtcaccacgcttttctattcctgc
ttctaccattacacagaaactgagggaacattcagtagtccagcaaacttgaagaaaact
ttcaagattccagacaaacagtacgtgctaacagctctggcggctcgtgccaaactccga
gcttggcatgatgtggat

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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