KEGG   Thamnophis sirtalis (common garter snake): 106550594
Entry
106550594         CDS       T06107                                 
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1-like
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106550594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsr03009]
    106550594
Ribosome biogenesis [BR:tsr03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    106550594
SSDB
Motif
Pfam: EFG_C EFG_III GTP_EFTU_D2 EFG_IV SSXT
Other DBs
NCBI-GeneID: 106550594
NCBI-ProteinID: XP_013924006
UniProt: A0A6I9YII1
Position
Unknown
AA seq 846 aa
MVYMSQYTNIPDAGSVLLKTLWGDYYLNMKAKRIMKVDQLKGKKPLFVQLVLENIWSLYE
AVTKRDKEKIEKIISSLGLQIAARELRHTDPKVQLNAICSQWLPISDAVLSMVCDKLPSP
LDITAERVEKLLCIGAKTFDSLPQETQDLKEAFMKCSSEETAPVVVFISKMFAVDAKTLP
QNKPRPLSQEEIAERRERARQRRAEKLVAAQQSTSEGIGGSLMEPTVEVEDNRGDNQLPT
LQSETNIVATGREELEAKEAFLAFARVFSGVVKKGQKLFVLGPKYDPAQSLHKLPLGCSP
ADTLPPVPHLACCTLEDLYLLMGRELEELQEVPSGNVLGIGGLQEFVLKSATLSSSPACP
PFNPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQVLIQETGEHVLITAGEV
HLQRCLDDLKERFARIEISVSEPIIPFRETITRPPKVDMVNEEIGKQQKVAVIHQSKEEQ
NKIPEGVQVDSDGLITISTPNKYTTLSVRATPLPEEVTQLLEENSELIRTIERVTSSLNE
DKKTEEMNQKTLDRIQEFKQKLEQHLQGWKWRNAVDGIWSFGPRKCGPNLLLNRCEGYKR
SVWQCLEGVKPAKEASLYRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVEKWDMSRFAE
QMSLKRQYSEEGKATGETEGNEEPPSPSRTETQPVSENEPQEDERCSLKSLNKRKGEVLN
ADCYGPFSGQLIATMKEACRYAMQAKPQRLMAAMYTCEIMATAEVLGRVYAVLSKRVGRV
LQEEMKEGTDIFIIKALLPVAESFGFADEIRKRTSGLASPQLIFSHWEVKISVHPLYPSM
KDFLRL
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggtctacatgagccagtatacaaatattcctgatgcaggcagtgttttgctgaagact
ctctggggagattattatttaaatatgaaagctaagaggatcatgaaagttgatcagctg
aaagggaaaaagcctctgtttgtgcaactggtgctggaaaatatatggagtctctacgag
gcagtgaccaagagagacaaagagaaaatagagaaaataatctcctctctaggactacaa
attgccgctcgtgaattacgtcacacggatccaaaggttcagctcaatgccatttgtagt
cagtggctaccaatatcagacgcagttctttccatggtttgtgacaaactgcctagtcct
cttgatatcactgctgagagagtggaaaagctactgtgcattggagccaaaacgtttgat
tccctgccacaagaaacacaagatctaaaagaggcgtttatgaaatgcagcagtgaagaa
actgcccctgtcgttgtgtttatatccaaaatgtttgcagttgacgctaagactttaccg
cagaacaaaccaaggcctttgtcgcaagaagagatagcggaaagacgtgagcgggcgagg
cagcggcgtgctgaaaagttggtggctgctcaacagtcgacgtctgagggaattggagga
agtttgatggagccaactgtagaggtggaagataatcgaggggataaccagctgcccact
cttcaatcggagaccaacatcgtggctacggggagagaggagcttgaagccaaggaagct
ttccttgcttttgcgagggtgttcagcggtgttgtgaaaaaggggcagaagctctttgtc
cttggaccaaagtacgatcccgcacagtcactgcacaagcttcctctgggatgttctcct
gctgatactctaccacccgtgcctcatttagcttgctgcacattggaagacctctattta
ttaatggggagagagctggaggaattacaggaagtgccctcggggaatgtgcttggaata
ggtggtttgcaagagttcgttttgaaatcggcaaccttatcttcctctccggcttgtccc
ccgtttaatccactcaacttcgaagcaacgccgatcgtacgagtggccgtggagccgaag
cacccaagcgagatgcctcaattggttaaaggaatgaagctcctaaaccaggctgatccc
tgtgtgcaggtgttgatccaagagacgggcgaacatgtcttaattaccgcaggggaagtc
catcttcagcgctgtttggatgacttgaaagaaaggtttgcccggatagaaatcagcgtc
tcagagcccatcatccccttccgagaaaccatcacaaggcctcccaaggtggatatggtg
aacgaagaaatcgggaagcagcagaaagtggccgtcatccaccagagcaaagaggagcag
aataaaatccccgaaggggtccaagtagattcggatggactcataacaatctccacgcca
aacaaatacaccaccctgagcgtacgagcgacgccgttgccggaggaagtaacccaactg
ctggaggaaaacagcgaattgattcgaaccatagagcgggtcacctcttccctcaacgaa
gacaagaaaacggaggagatgaaccagaagacgctcgaccggatacaggaattcaaacag
aagctagaacaacacctgcagggctggaaatggagaaatgctgtggatgggatctggtcc
ttcggccctcggaaatgcggaccgaacctcctattgaaccgatgcgaaggctacaagaga
tctgtttggcagtgcctcgaaggcgtcaagccggccaaagaagccagtctgtatcgggat
tttgacaacagcatcgtaagcgggtttcagttggcgacgctctccggaccgatgtgtgaa
gaaccactgatgggcgtctgcttttcagtggagaaatgggacatgagcaggtttgcggag
caaatgtcactcaagaggcaatattcagaggaggggaaggctacgggagagaccgaaggc
aatgaggagcccccctctccgtcaaggacggagactcaacccgtttctgaaaacgaaccc
caggaggacgagaggtgcagcctgaaatcactgaacaagcgcaaaggggaggtgttgaac
gcggactgttacggccctttctcaggccaactgattgccaccatgaaggaagcgtgccgc
tacgccatgcaggccaagccccagaggcttatggccgccatgtacacctgtgaaattatg
gcaaccgcggaagtcctaggtcgtgtttatgctgtcctatccaagcgagtgggccgagta
ttgcaagaggagatgaaggaagggacggacatcttcatcatcaaggcattattgccagta
gcggagagctttggttttgctgatgaaatcaggaagagaacgagcgggctcgccagtcca
cagttgatcttcagtcactgggaggtaaaaatttctgttcaccctctttatccatcgatg
aaagatttcctaaggttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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