KEGG   Thamnophis sirtalis (common garter snake): 106551474
Entry
106551474         CDS       T06107                                 
Symbol
KDM6A
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsr03036]
    106551474 (KDM6A)
Enzymes [BR:tsr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     106551474 (KDM6A)
Chromosome and associated proteins [BR:tsr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     106551474 (KDM6A)
   Histone demethylases
    106551474 (KDM6A)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL TPR_1 TPR_17 TPR_2 TPR_16 TPR_8 TPR_12 TPR_11 TPR_19 TPR_9 TPR_7 ANAPC8 SNAP ANAPC3
Other DBs
NCBI-GeneID: 106551474
NCBI-ProteinID: XP_013925055
UniProt: A0A6I9YMM8
Position
Unknown
AA seq 1486 aa
MKSCGVSLAAAAAAASTAFGDEEKKMAAGKASGQSEEDFASLTAEEREVLSGLDSRLFGF
LRLHEDGARTKALLLKAVGCYESLILKAEGKVESDFFCQLGHFNLLLEDYPKALSAYQRY
YSLQSDYWKNAAFLYGLGLVYFHYNAFQWAIKAFREVLYVDPSFCRAKEIHLRLGLMFKV
KTDFESSFKHFQLALIDCNPCTLSNAEIRFHVAHLYETQKHPVEEEHPLDPTHFWERKRL
FHLWSSSPGSNPRKYHLAKKEYEQLLQSENLPAQVKATVLQQLGWMHHTVDQLGDKATKE
NYAIQCLQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGV
LYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQSQDAIKCYLNATRSKNCSN
TSALAARIKYLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTTQQACK
PHQNTEPVLGLSQTPISQQLPLHMIPSSHVDDLSSPAKRKRPSSPTKNTLEAWSSGHTMS
HPPPVQQQIHSWCLTPQKLQHLEQLRANRNSLNPAQKLMLEQLESQFVLMQQHQQMRQMG
VAQVRSTGIANGPTTYSSLPTNSVSGPQPQVALTRVPNITQHGIRPTCPGQPMANGPFSA
GSVPCSTAKTLSSTDTILIGNNHITGSGSNGNVPYLQRNVLSLPHNRTNLTSSAEEPWKK
QLSNSTQGLQKSQSSHLAGPNSERPLSSTGPSQHLQAAGTGIQNQNGHPTMPSNSVTQGA
ALNHLPSHTATSGGQQGITLTKESKPSGNTSAVPDINRHSGETLNSTASVEGLPNHVHQV
TADAVSSPSHGDSKSPGLLSSDNPQLSALLMGKANNNVGTGTCDKVNNIHPTVHTKTENS
VASSPSSAISTATPSPKSTEQTTTNSVTSLNSPHSGHAVNGEALEDSQSPIKINPPLIGH
KPNSPIMPSMSVSIYPSSAEVLKACRNLGKNGLSNSSILLDKCPPPKPPPPPYPPLPKDK
LNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLGLFSTKTLVEANNE
HLVEVRTQLLQPSDENWDPTGTKKTWHCESSKSQSTIAKYAQYQASSFQESLREENEKKS
HHKDHSDSESTSSDNSGKRKRGPFKTIKFGTNVDLSDDKKWKLQLHELTKLPAFVRVVSA
GNLLSHVGHTVLGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPENYWG
VMNDFCEKNNMNFLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAVGWCN
NIAWNVGPLTACQYKLAVERYEWNKLQSVKSVVPMVHLSWNIARNIKVPDPKLFEMIKYC
LLRTLKQCQTLREALIAAGKEIVWHGRTKEEPAHYCNICEVEVFNLLYVTNESNSQKTYV
VNCLDCARKISGNLENFVVLEQYRMEDLMQIYDQFTLAPPLPSSSS
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgaaatcgtgtggagtgtcgctcgccgctgccgccgccgctgcctctactgctttcggt
gatgaggaaaagaaaatggcggcggggaaagcgagcggccagagcgaggaggacttcgcg
agcctgacagcggaggaaagagaagtcctctctggcctcgacagccgactcttcggattt
ttaaggcttcatgaagatggcgccagaacgaaggccttgctgttaaaggctgttggctgc
tatgaatcgttaatattaaaagcagaaggaaaagttgaatcagatttcttttgccagtta
ggtcacttcaaccttttattggaagattatccaaaagcattatctgcataccagaggtac
tacagtttacaatctgactactggaagaatgctgcctttttgtatggccttggcttggtc
tacttccattacaacgcatttcagtgggcaattaaagcatttcgggaagtgctttatgtt
gatcccagtttttgccgcgccaaggaaattcatttacgacttgggcttatgttcaaagta
aaaacagattttgagtctagttttaagcattttcagttagctttgattgactgcaatcct
tgcactttgtccaatgctgaaattcggtttcatgttgcccatttatatgaaacccagaag
catccagttgaggaggagcatccactggatccaactcacttctgggaacggaagaggctc
ttccatttgtggagcagcagccctggatccaacccaagaaaatatcatttggcaaagaag
gaatatgaacaacttttgcagtctgaaaaccttcctgcacaagtaaaagcaactgtgttg
cagcagttaggctggatgcatcatacagtggatcaattaggagataaagccaccaaggaa
aactatgctattcaatgtctccaaaagtctctagaggcagatccaaactctggccaatcc
tggtatttccttggaaggtgctattcaagtattgggaaagttcaggatgcctttatttct
tataggcaatctattgataaatcagaagcaagtgcggacacatggtgttctataggtgtg
ctgtaccaacaacagaatcagcctatggatgcattacaggcttatatctgtgctgtacaa
ttggaccatggccatgctgcagcctggatggatcttggcactctctatgaatcctgcaat
cagtctcaggatgccattaaatgctacttaaatgcaaccagaagcaaaaactgtagtaat
acctctgcacttgcagcacgaataaagtatttacaggctcagttgtgtaaccttccacaa
ggtagtctacagaataaaactaaattacttcctagtattgaggaggcatggagcctacca
atccccgcagagcttacctccaggcagggtgccatgaacacaacacagcaggcttgtaaa
cctcatcaaaatactgaacctgttctaggcctcagtcagacacctatttcacagcagttg
ccactacacatgattccttctagccatgtagatgacctgtccagtccagccaagaggaaa
agaccatctagtccaaccaagaacactttagaggcttggagcagtggccacacaatgtca
catcctcctccagtacagcagcaaatacattcttggtgcttgacaccacagaaattacag
cacttggaacagctgcgtgcaaatagaaatagtttaaatccagcacagaaacttatgctg
gaacagctggagagtcagtttgtcttgatgcagcaacaccagcagatgaggcagatggga
gttgcacaggtacgatctactggaattgctaatgggccaacaacttactcatcactgcct
acaaactctgtctctggtccgcagccacaggttgctctaaccagagtacctaacatcacg
cagcacggaatccgtccaacctgtcctgggcagcctatggcaaatggacccttttcagca
ggctcagttccctgcagcacagcaaaaacgctgagtagtacagacactattttgataggc
aataatcacataacaggaagtggaagtaatggaaacgtgccttacctgcagcgaaacgta
ctctctctacctcataaccgcacaaacctgaccagcagcgcagaggagccgtggaaaaaa
caactatctaactccactcaggggcttcaaaaaagtcagagttcacatttggcaggtcct
aatagtgaacgacctctctcttccactgggccttcccagcatctccaggcagctggcact
ggtattcaaaatcaaaatggacatcctaccatgcctagcaattcagtaacacagggggct
gctctcaatcacctcccctctcacactgctacctcaggtggacaacaaggcattacctta
accaaagagagcaagccttcaggaaatacatcagcagtgcctgacataaacaggcattct
ggagagacacttaacagcactgccagtgtagaaggacttcctaatcatgtccatcaggtg
acggcagatgctgtttctagccctagccatggagattcaaagtcaccaggtttacttagt
tcagacaatcctcagctctctgccttgttgatgggaaaagccaataacaatgtgggtact
ggaacctgtgacaaagtcaataacattcatccaacggttcatacaaagactgaaaattct
gttgcctcctcaccatcttcagccatttccacagcaacaccttctccaaaatctactgag
cagactaccacaaacagtgttaccagccttaacagccctcatagtggacatgcagttaat
ggagaggcattggaggactctcagagccccataaaaatcaatcctcctcttattggacac
aaacctaattcccctatcatgccatctatgtcggtatctatatatccaagttctgcagag
gttctgaaagcatgcaggaatttgggcaaaaacggcctatcaaacagtagcattttattg
gataaatgtcctcctccaaaaccaccaccacctccatatcctcccttgccaaaggataag
ctgaatccacctacacctagtatttatctggaaaataagcgtgatgctttcttcccacct
ttacaccaattttgtacaaatccaaacaatcctgttactgtaatacgcggccttgctgga
gctcttaaattagatctgggactcttctctaccaaaactttggtagaagctaataatgaa
cacttggttgaagtaaggacacaattattgcaaccatcagatgaaaactgggatcctact
ggaacaaaaaaaacatggcattgtgaaagcagtaaatctcagtctacaattgctaaatat
gcacaataccaggcctcctcattccaggaatccttaagggaggaaaatgaaaaaaagagt
caccataaggaccattcagacagtgagtcaacatcgtctgataattctgggaagaggaaa
aggggaccttttaaaactatcaagtttgggaccaacgttgatttatcagatgacaagaaa
tggaagctacagctacatgaacttacaaagcttcctgctttcgtgcgagtagtatcagca
ggaaaccttcttagtcatgttggtcatacagtcttaggaatgaatacagttcagttgtat
atgaaagtcccaggcagcagaacaccaggtcatcaggaaaataacaatttttgctcagtc
aatataaatataggcccaggtgattgtgaatggtttgttgttccagaaaattactggggt
gtcatgaatgacttctgtgaaaaaaacaatatgaattttctaatgggttcttggtggcct
aatctggaagatttgtatgaagccaatgttccagtttataggtttattcaacgacctgga
gatctagtgtggataaatgctggaactgttcattgggttcaggctgttggctggtgtaat
aatattgcctggaatgttggccctcttacagcttgtcaatataaattagctgtggaacgg
tacgaatggaataaattgcaaagtgtgaagtcagtagtacctatggttcatctttcttgg
aacatagcacgaaatatcaaagtaccagatccaaagctttttgaaatgatcaagtattgc
ctgttgagaactctcaagcaatgtcagactttgagggaagctctaattgctgcaggaaag
gagattgtatggcatgggagaacaaaagaagaaccagctcattattgtaacatatgtgag
gtagaagtcttcaatttgctttatgttacaaatgagagtaattctcaaaaaacctatgtt
gtaaattgcctagactgtgcacggaagataagtgggaacctggaaaactttgtggtgcta
gaacaatacagaatggaggatctaatgcaaatctatgaccaatttacattagcacctcca
ttgccatcatcttcatcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (16)   
   Pfam (16)   
All databases (37)   

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