KEGG   Thamnophis sirtalis (common garter snake): 106552411
Entry
106552411         CDS       T06107                                 
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106552411 (APLF)
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     106552411 (APLF)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     106552411 (APLF)
SSDB
Motif
Pfam: zf-CCHH UDPG_MGDP_dh
Other DBs
NCBI-GeneID: 106552411
NCBI-ProteinID: XP_013926148
UniProt: A0A6I9YNT5
Position
Unknown
AA seq 370 aa
MRSQSQPSEQSTISSSKNQLSEVHSLMEKATEIPERFTLPKIEESRPAQRKRQLPEWMLT
ADLMVSSQSISASKNGSNEEEKPGVSKKQKILESEDSALLKEGVFTKDVAKKMPRNGSKK
ISQKLESSFEQFNNELDDEEMDLDLKSDEQASQSAQVHTTNIKENKLEIANAKTRQVYKE
KPSQSLLSQDDIQETTLNQTTGIDTSNITESQEMQQRISQRISCQYGNSCYRKNPIHFQQ
FSHPGDSDYHDLEALTQVDDDRPECPYGTACYRKNPQHKLEYKHTTPPESDRRQRSKVTR
KVRSVLADESDDDGEANEYNLNDSFIDDEEEEESDPTDEDSDWQPDCQDNDGEDMDMLLK
EAQNFVKTKN
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagatctcagagtcagccttcagaacaatcaacaatttcttctagcaaaaaccaactt
tcagaagtacattcacttatggaaaaagcaaccgaaatcccagagaggtttactcttcct
aaaatagaggaatcaagacctgctcagcgaaaaagacagcttccagaatggatgctgaca
gcagatctaatggtttcaagccagtcaatctcagcctctaaaaatggtagtaatgaagaa
gaaaagccaggtgtaagtaaaaagcagaaaattcttgaaagtgaagattctgcccttcta
aaagagggggtatttactaaagatgttgcaaagaaaatgccaaggaatggaagtaaaaaa
atatctcagaaacttgaaagttcgtttgagcaatttaacaatgagctggatgatgaagag
atggacctggacctcaagtcagatgaacaagcatctcagtctgctcaagtacatacaaca
aatataaaagaaaacaaattggagattgctaatgctaaaaccaggcaggtttataaggaa
aagccatcacaatcattactcagtcaggatgatattcaagagactactctgaatcagact
actggaatagatacttcaaatataaccgaaagtcaggagatgcaacagaggatttcccag
aggatttcttgtcagtatgggaacagctgctacagaaagaatcctatacatttccagcaa
tttagtcaccctggtgatagtgattatcatgacttagaagctttaactcaggttgatgat
gataggcctgaatgtccttatggaacagcttgttacagaaaaaatccacagcacaagttg
gaatataaacacacaactcctcctgaatctgatagaaggcagagatcaaaagttacaaga
aaagtaagaagtgttcttgcggatgagagtgatgatgatggtgaagcaaatgaatacaac
ttgaatgacagttttatagatgatgaagaggaggaagagagtgatcctactgatgaagat
tctgattggcaaccagattgtcaagacaatgatggtgaagatatggacatgcttctcaaa
gaagcacagaattttgttaaaaccaagaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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