KEGG   Thamnophis sirtalis (common garter snake): 106553878
Entry
106553878         CDS       T06107                                 
Symbol
NPLOC4
Name
(RefSeq) nuclear protein localization protein 4 homolog
  KO
K14015  nuclear protein localization protein 4
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106553878 (NPLOC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsr03009]
    106553878 (NPLOC4)
Ribosome biogenesis [BR:tsr03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    106553878 (NPLOC4)
SSDB
Motif
Pfam: NPL4 zf-NPL4 UN_NPL4 zf-RanBP
Other DBs
NCBI-GeneID: 106553878
NCBI-ProteinID: XP_013927935
UniProt: A0A6I9YWF7
Position
Unknown
AA seq 609 aa
MAETIIIRVQSPEGVKRITATKRETAATFLKKVAKEFGFRNNGFSVYINRNRTGEITSSP
NKSLNLLKIKHGDMLFLFPSSTPGSSSENMDTSISQGTRPLGVPQVVEDEIDQYLIKQDG
KIYRSRDQQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMSFHAYIRKLTGGADKGK
FVALENISCKIKSGCEGHPPWPEGICTKCQPSAITLNRQKYRHVDNIMFENHTIADRFLD
FWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVSAIYEPPQIGTQNSLELLEDPKAEVVDEI
AAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDAFFLSAEECITAGHFQNQQPNICRLSP
DGHFGSKFVTVVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCRDAPELGYAKESSSEQ
YVPDVFYKDIDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSISQSQFPIENRDVL
GETQDFHILATYLSQNTSSVFLDIISDFHLLLFLVTNEVMPLRDSISLLLEAVRTRNEDL
AQTWKKSEQWATIEQLCSTVGVQLPGLQEYGAMGTSTHATTSSMWACQHCTFMNQPGTDH
CEMCSLPRS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcggagaccattataatccgtgtccagtcaccagaaggagtgaaacgtattactgca
acaaaacgagaaactgctgcaacatttctgaaaaaggttgcaaaagaatttggcttcaga
aataatggattttctgtgtacatcaatagaaacaggactggtgagatcacatcctctccc
aataaatccctcaacttactgaagatcaaacatggagatatgctatttctttttccatca
agcacacctggctcttcctctgagaacatggatacctcaatttctcaaggaacacgtcca
ctaggtgttccccaggtggtagaagatgaaattgatcaatacctaataaaacaggacggg
aaaatttatagaagcagagaccagcaattatgtcggcatggtccattgggcaaatgtgta
cattgtgtacctttagagccttttgatgaggattatttaaaccatctggaacctcctgtg
aagcatatgtcattccatgcctatatcaggaaactgactggaggtgcagacaaggggaag
tttgttgctcttgaaaacattagctgcaagattaaatctggatgtgaggggcatcctcca
tggccagaaggaatctgtaccaagtgccagccaagtgctatcacactcaacaggcagaaa
tatagacatgtggataatatcatgtttgagaaccatacaattgcagatcgtttcttggac
ttctggagaaaaacaggaaaccaacattttggatatctatatgggaggtacacagaacat
aaagacattcctctgggtattcgagctgaggtttctgccatctatgaacctccacagatt
ggtacacaaaatagtctagagctcctggaagacccaaaagcagaggttgtggatgagatt
gctgcaaaacttggcctaagaaaggttggctggatattcacagatctggtttcagaggac
acacggaaggggactgttcgctacagccgaaacaaagatgcctttttccttagtgcagaa
gaatgtattacagctgggcattttcagaaccagcagccaaacatatgtcgcttgtctcca
gatggacattttggatctaagtttgtgactgttgtggctacagggggtcctgacaaccaa
gtccactttgagggctaccaagtatccaatcaatgcatggctctagtacgtgatgaatgt
ttgttgccatgccgtgatgctccagaactcggctatgcaaaggaatccagcagtgaacaa
tatgtgcctgatgtcttctataaggatatagacaagtttggcaatgagatcactcagcta
gctcgtcctctccctgttgagtacctaatcatagatattactaccacgtttccaaaagat
ccagtttacacattttctatttctcaaagtcaattccctattgagaatcgtgatgtactg
ggagaaactcaggacttccacattctagctacatatttgtcccagaatacctcttctgta
ttccttgacatcatctctgatttccatcttctcctcttcttggtcaccaatgaagtgatg
cctttaagggatagtatcagcttgttgctggaggcagtaagaacccggaatgaggatctc
gctcagacctggaaaaaatctgaacagtgggctaccattgagcagctttgcagcacagtg
ggtgttcagttgccaggactccaagaatatggcgccatgggcacttcaacacatgcaaca
acttcttcaatgtgggcctgtcagcactgcaccttcatgaaccaaccaggcacagatcat
tgcgagatgtgtagcctcccacggagctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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