KEGG   Thamnophis sirtalis (common garter snake): 106555468
Entry
106555468         CDS       T06107                                 
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106555468 (THOC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106555468 (THOC5)
   03041 Spliceosome [BR:tsr03041]
    106555468 (THOC5)
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106555468 (THOC5)
Spliceosome [BR:tsr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106555468 (THOC5)
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 106555468
NCBI-ProteinID: XP_013929798
UniProt: A0A6I9YYM8
Position
Unknown
AA seq 344 aa
MLKKHPLSVTINLKCKDGSLLFLTFYYLMNLNVLTVKAKMTAATEMTVPISAGDLLCPDS
LLSCLYPGDHGKRTPNPANQFQFDKVGILTLNDYVPELGHPYVWVQKLGGLHFPKDQPQN
PVVADNSLSASHMERTMKLLKTRLESRLALHKQFASLEHGILPVSPESQHLFPAKIMSHL
VKWMSLTYEDYMELPYTKDVVESGLAEDTHLYYLALIERGTAKLQASVVLNPGYSSIPPV
FSLCLNWKGEKTSMNDDNIRAMESEVNVCYKELCGPKPGYQLLTNQLQRLCVVLDLYLET
ETHDNSVEGPKEFPQEKMCLRLARGPSRLKPFKYNYSQGFFSHR
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgttgaagaagcaccctctgtccgtcaccatcaacctgaagtgcaaagatggcagtttg
ctgttcctgaccttttactacttgatgaacctcaacgtcctgaccgtcaaggccaagatg
accgcagccacggagatgaccgtgcccatcagcgctggggacctgctgtgccccgattct
cttctgagctgcctctatcctggggaccacggaaagaggaccccaaaccccgccaaccag
ttccagttcgacaaagtgggcatcctgaccctgaacgactacgtgcctgaactgggccat
ccatacgtatgggtgcaaaaactggggggtttgcacttccccaaggaccaaccccagaat
cccgtggtcgccgataactcgctgagtgctagccacatggagaggaccatgaaactgctc
aaaacgaggttggagtcgcgcctggcccttcacaagcaatttgcttcccttgaacatggc
attctgcccgtctcccctgagtctcagcatctcttccccgccaagattatgtcgcatttg
gtgaagtggatgtccctcacgtacgaagattacatggagctgccttacactaaagacgtg
gttgagtctggtttggctgaagatactcacctctactacttggcactgatcgagagaggc
acagccaagctccaggcctccgtagtgttgaaccccggatattcctccatcccgcccgtc
ttcagcctgtgcttgaactggaaaggggagaaaaccagcatgaatgatgacaacattcgg
gccatggagagtgaggtcaacgtctgttacaaagaactgtgcgggccaaaaccgggctac
caactcctcaccaaccagttgcaacgcctttgcgtcgtcctggatttgtacctggagact
gagacacacgacaatagtgtggaaggtcccaaggaatttccacaggagaaaatgtgcctc
cgtttggccaggggacccagccggttaaaacccttcaaatacaactactcccaaggcttc
ttcagccatcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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