KEGG   Thamnophis sirtalis (common garter snake): 106556591
Entry
106556591         CDS       T06107                                 
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03013  Nucleocytoplasmic transport
tsr03015  mRNA surveillance pathway
tsr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106556591
  09122 Translation
   03013 Nucleocytoplasmic transport
    106556591
   03015 mRNA surveillance pathway
    106556591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106556591
   03041 Spliceosome [BR:tsr03041]
    106556591
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106556591
Spliceosome [BR:tsr03041]
 Complex C
  Other components
   EJC/TREX
    106556591
SSDB
Other DBs
NCBI-GeneID: 106556591
NCBI-ProteinID: XP_013931052
UniProt: A0A6I9Z327
Position
Unknown
AA seq 764 aa
MARLGGEKETPFSGVRSSSVAAVLVSIPVIKRASKPVTNIASLLLLRIVLAERTQRTVLI
CVIMYRIPARTVKTAGGGHALVSEEREPSLRSRRAAQRVPVKEEEEEEEEEEEEEEEEEE
EEEEEEDAPPLLVGQTPMRPEEPGMPAPQETGILQASLPIVLQAQQTETRSQTPDSPSGE
AAIPVLAHLQRSEDEEAQPRATDPGEKQQAALIPAESPVEKDSLPDPPKEVAPQLPEALK
METEEDPKEPRSTETPQEEKEEEEMMEQGETPAAVVLQKEGEPQNKGTPEAEATQALRRL
EEEASAAAAALVHASPSPPQLTEAQQSQQDPRGDEPPPPLLTKEAPAGLAPAEDEAPPQL
SQLSPPAQEAPTVASRGASPSPLALPPHQPVRAGSSRSSSSSSSSSSRSRSRSPGSSPPR
SRARRTRSASSESPARKRPALESRSRSGSERRSSSESRSRSSSRGSSSSKSRSREASRDS
TSFPPTKEPSRPGACFPPHSAKAQHQEIPSSPREEGRRTPSPPARQHSHTPPPQPPARSM
QAESTFPERGRPEPLNPTVTEESVLDIGGLASEPPRPIEPPGSKTEEKQTMPMELSEPQP
ENEALEPGGPEDQPSAEPPGPEDEEKKEGSTQPKAFKRKISVVSSSVTKGPVATNSDTEG
SQPAGRKRRWGASTATTQKKPSISITTESLKSLIPEIKPPLGGQEAVVDLHADDSRISED
EAERHLEEPAHEKALKICRTVTQVVPVEGQENGQGEEEEEEEEK
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggcccggttgggtggagaaaaggaaaccccgttctctggcgtcaggtcctcgagtgtc
gccgcggtgttggtttccattcccgtcattaaaagagcctcgaaaccagtgacaaacatc
gcgagcctcctcttattgcgcatcgtcctcgccgagaggacccagcgaaccgtgctcatc
tgtgtgatcatgtatagaattccagcccgaacagtgaagaccgcgggaggtggccatgca
ctggtgagcgaagagcgggagccttcccttcggagtcggagagctgcccagcgggtgccg
gtcaaagaggaggaagaagaagaggaagaggaagaagaggaggaggaggaggaagaagag
gaggaggaggaggaagaagatgcacctcctttgctggtcggccagacgcccatgaggccg
gaggagccgggcatgccagctccccaagagacgggcatattgcaagcttccttgcccatc
gtcctgcaagcccagcaaacggagacgcgctctcagaccccagacagcccgagtggcgaa
gccgccataccagtcctcgcgcacttgcagaggtcagaagacgaggaggctcagccccgg
gcaacagaccccggagaaaagcagcaggcagctctaatcccagcggaatcccccgtggaa
aaggattccctcccggatcccccaaaggaggttgcaccccagttacctgaagccttaaaa
atggagaccgaggaagacccgaaggagccacggtcgaccgaaactccccaagaggagaag
gaagaggaagagatgatggagcagggcgagaccccggcggctgttgtcttgcagaaggag
ggcgaaccccagaacaaggggaccccagaagcagaggcaacccaggcgctgcgccgccta
gaggaagaggcgtcggcagccgcggcggcgctggtgcacgcctctccatctcccccgcag
ctgaccgaagcacaacagtcccaacaggatccccgtggggacgagccgcctccaccactc
ctgaccaaggaagcccctgcgggactcgctcccgccgaagacgaagcccctcctcagctc
tctcagctgtctccccccgctcaggaagcaccgactgttgccagccgtggagcctcgcca
tcccccttggcgctcccgccacatcagcccgtacgggccggcagctcccgctcgtcctcg
tcctcttcctccagctcctcccgttctcgttcccgctccccgggcagctcgccgccccgc
tcccgggcgaggaggacccgctccgcttcctccgaatcgccggctcggaagcggccagct
ttggaatctcgatcccgctccggctcggagcggcggagcagttcggagtcccgctcccgt
tccagcagcaggggcagcagcagtagcaagtcccgcagccgcgaagcttcccgggacagc
accagcttcccccccaccaaagagccctcccgacccggggcctgcttcccaccccacagc
gccaaagcccagcaccaagagatcccatccagccccagggaagaagggagaaggaccccc
tcccctcctgcgaggcaacacagccacaccccaccaccacaaccaccagcacgcagcatg
caggccgagagcacatttccagaacgaggcaggccagagcctctcaatccaacggtgacg
gaggagtctgtcctagacatcgggggtctcgcctcggagccgccgcgcccgatcgagccg
ccgggcagcaaaaccgaggagaagcagacgatgcccatggagctgtcggagccccagccg
gagaacgaggccctggagcccggtggccccgaggaccagccttccgcagaacccccgggc
cccgaagacgaggagaagaaagagggttcgactcaacccaaggccttcaagaggaaaatc
tccgtcgtctcatcctccgtgaccaaagggccagttgccacaaacagtgacaccgaagga
agccagccggcgggccgcaaacggcgctggggcgccagcaccgccacgacccagaagaaa
ccttcgatcagcatcaccaccgaatccctcaagagcctgatcccagagattaagccaccg
ctaggaggtcaggaagctgtggtggaccttcacgccgacgactcccgcatctccgaagac
gaagccgagcgccacttggaagagccagctcacgagaaagcgctcaagatctgccgtacc
gtcacgcaggtggtcccggttgaagggcaagagaacggccaaggggaggaagaggaagag
gaagaggaaaag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
All databases (13)   

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