KEGG   Thamnophis sirtalis (common garter snake): 106556894
Entry
106556894         CDS       T06107                                 
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04136  Autophagy - other
tsr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    106556894 (ATG4C)
   04136 Autophagy - other
    106556894 (ATG4C)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tsr01002]
    106556894 (ATG4C)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsr04131]
    106556894 (ATG4C)
   03029 Mitochondrial biogenesis [BR:tsr03029]
    106556894 (ATG4C)
Peptidases and inhibitors [BR:tsr01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   106556894 (ATG4C)
Membrane trafficking [BR:tsr04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    106556894 (ATG4C)
Mitochondrial biogenesis [BR:tsr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    106556894 (ATG4C)
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 106556894
NCBI-ProteinID: XP_013931406
UniProt: A0A6I9Z645
Position
Unknown
AA seq 462 aa
MNLNMEASGTDEVEKIKSKFVSAWNNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKSDEPS
DQSPNGSCDDMTEERFSRNIEEFRKDFISRIWLTYREEFPQIKGSVLTTDCGWGCTLRTG
QMLLAQGLILHFLGRDWTWANAFVFENPESESWTTQTVKKLTASLETSLIGEREFRNQSN
HPKSPMHIRESEESVEEQYHRRIISWFGDSPLANFGLHRLIEYGSKSGKTAGDWYGPAVV
AHLLRKAVEKARDPELQGITIYVAQDCTVYKSDVIDALCPFTDSEKTGAKSVIILIPVRL
GGERTNMEYLEFVKGILSLDYCIGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSV
KDFPLESFHCSSPKKMSFKKMDPSCTIGLYCRDVQGFERTAEEITKILKSSSKEKYPLFT
FVSGHSRDYDFVASPVQEEKTMFSEDEHKKLACFNNEDFVLL
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgaatctgaatatggaggccagtgggacagatgaagtagagaaaataaaatcaaagttt
gtatctgcatggaataatatgaaatatagctgggtactgaaaaccaaaacttactttagc
agaaattctcctgtctttttgctgggaaaatgctaccatttcaagagcgatgaacccagt
gaccagtcaccaaatggttcctgtgatgacatgacagaagaaaggttttccagaaacatt
gaagagttccgtaaagactttatttctaggatatggttgacttacagagaagaatttccc
caaatcaagggttcagttttaaccacagactgtggctggggctgtaccttgaggactgga
caaatgcttctggctcaaggacttattctccactttcttggtagagattggacttgggcc
aatgcctttgttttcgagaatccagagtctgaatcatggacaactcagacagtaaaaaag
ctcacagcatctcttgaaacatcccttataggagaaagagaattcaggaaccagtcaaat
catcctaaaagtccaatgcacatccgagaaagcgaagaaagcgtggaggagcagtatcac
cgaagaatcatatcttggtttggtgattcaccccttgccaattttggcttgcatcggctg
atagaatatggaagtaaatctgggaaaacagctggagattggtatgggccagcagtggta
gcacaccttttgaggaaagcagttgaaaaagcaagagaccctgagttacaaggaataacc
atctatgttgctcaagactgtacagtttacaagtccgatgttattgatgctctctgccct
ttcacggattctgaaaagacaggtgccaaatctgtgattatattaattcctgtcaggctt
ggtggtgaacgcactaatatggaatacttggagtttgtgaagggaattttgagtctcgac
tactgcattggcattattggtggcaaacctaagcagtcatattacttcgctggttttcaa
gatgacagcttgatttacatggatcctcattattgccagtctttcgtagatgtcagcgta
aaggatttcccccttgagtctttccactgttcttctccaaagaagatgtcgtttaaaaaa
atggatccaagttgcaccataggactgtattgtcgtgacgtgcagggttttgaaaggact
gctgaagaaataactaagattctaaaatcctcatctaaagagaaatatcctttgtttact
tttgtaagcggacattccagagactatgattttgtggcgagtccagtccaggaagagaag
acaatgttctctgaagatgaacacaaaaagttggcgtgttttaataatgaagactttgtc
ttgctatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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