KEGG   Treponema succinifaciens: Tresu_1301
Entry
Tresu_1301        CDS       T01461                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
tsu  Treponema succinifaciens
Pathway
tsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tresu_1301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsu03019]
    Tresu_1301
   03009 Ribosome biogenesis [BR:tsu03009]
    Tresu_1301
Enzymes [BR:tsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Tresu_1301
Messenger RNA biogenesis [BR:tsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Tresu_1301
Ribosome biogenesis [BR:tsu03009]
 Prokaryotic type
  rRNA helicases
   Tresu_1301
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA UTP25 PhoH AAA_7 TsaE AAA_22
Other DBs
NCBI-ProteinID: AEB14209
UniProt: F2NRX3
Position
1395396..1396562
AA seq 388 aa
MNKFLELKVDESIVSKLEEIGITEPTEVQKKIIPLISEGKNIMFQSETGTGKTFAYLLPL
LSRLNSTENRMARFMIASPTYELASQIKVQVQKISGIKCALLIGGAPISRQIELLKEKPE
IVIGGPARLLELIHLKKLKADGIETLVLDEADRLLSPELRDSTKGLMERLPKSVQLIGNS
ATVSKYTREILQKARNGILNDEKENAILFVALPMENVLRKQISHWAIFSERRDKIDTLRS
FINAEKPKKLLVFTSKSDQIENIASKLRFKKIDCETLCGKTNKVDRKSAIDRFRSGKTKI
LITTDLASRGLDIEGITHVVQMDLPEKEDFFIHRAGRTARAGATGINCVIGDAWEMENYA
RLEKKLKITVFPKMLYKGNVVDPNSFNT
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaacaaatttttagaactaaaagttgacgagtcaattgtttcaaagcttgaagaaatc
ggcataacagaacctacagaagtgcagaaaaaaataattccgcttatttcagaaggaaaa
aatataatgttccaaagtgaaaccggaactggaaaaactttcgcatatctgctcccattg
ctgagccgtttgaattccacggaaaatagaatggcgcgatttatgattgcatccccgact
tacgagcttgcttcccagataaaagttcaggtgcagaaaatcagcggaataaaatgcgcc
ctgctgattggaggtgcgccaatttcacggcaaatcgagcttttaaaggaaaagcctgaa
attgtaattggaggtcccgcgcggcttcttgagctgattcatttaaaaaaactcaaggcg
gacggaatagaaactcttgttcttgacgaggctgaccggcttttaagtcctgaactcagg
gacagcacaaagggtcttatggagcgtcttccaaaatcagttcagcttataggaaattcc
gccactgtaagcaaatatacgcgcgaaattcttcagaaagcaagaaacggaattttaaat
gatgaaaaggaaaacgcgattctttttgttgcgcttccgatggaaaatgttcttaggaaa
caaatttcgcattgggcaattttttcagaaagaagagataaaatcgacacgctgcgaagt
tttataaatgcagaaaaaccaaaaaaacttctcgttttcacttcaaaatccgatcagatt
gaaaacatcgcttcaaaattaagattcaaaaaaatcgactgcgaaaccttatgcggaaaa
acaaacaaagttgacagaaaatcagcaatcgacaggttcagaagcggaaaaacaaaaatt
ctcattacaacagaccttgcttccagaggacttgacattgaaggcataactcacgttgtc
cagatggatttgccggaaaaagaagacttttttattcaccgcgcaggaagaacagcccga
gccggagcaactggaataaactgtgtaatcggagacgcctgggaaatggaaaactatgcc
cgccttgaaaaaaaacttaagataacggtttttccaaaaatgctttataaaggtaacgtt
gtcgatccaaattcctttaatacttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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