KEGG   Terricaulis silvestris: DSM104635_01026
Entry
DSM104635_01026   CDS       T06781                                 
Name
(GenBank) putative DEAD-box ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
tsv  Terricaulis silvestris
Pathway
tsv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DSM104635_01026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsv03019]
    DSM104635_01026
   03009 Ribosome biogenesis [BR:tsv03009]
    DSM104635_01026
Enzymes [BR:tsv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DSM104635_01026
Messenger RNA biogenesis [BR:tsv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DSM104635_01026
Ribosome biogenesis [BR:tsv03009]
 Prokaryotic type
  rRNA helicases
   DSM104635_01026
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_22 CMS1
Other DBs
NCBI-ProteinID: QGZ94210
UniProt: A0A6I6MHA4
Position
1062794..1064596
AA seq 600 aa
MSAFDNVIPALARALTARGFEALTAVQSAVLSPDVQGEDLVVSAQTGSGKTVAFGLTLAN
TLLDGQAKLAQPGAPQALIIAPTRELAMQVRGELEWLYAPIGGRIVSCVGGMDMRDERRA
LNRGAHIVVGTPGRLVDHIRRGSLEMHGLKAVVLDEADEMLNLGFREELEHILEASPAER
RTLMFSATMPRPIEALAQKFLRDAVRLNTGGGQKQHADIEYRALVAQGHESENAIFNVLR
YYNPTNALVFCGTRAAVTRLESRFSNRGMSVVALSGELSQNARTHALQALRDHRAQVCVA
TDVAARGIDLPDLELVIHADLPKNTEALLHRSGRTGRAGRKGASVLIVPYSARRRTERLL
RDANINAKWGEPPSADDIKRRDDERLLADPLLQAPPEASDQQIVRALLDQHDPVQIAAAF
VRLYRKGQAAPEDLAPTQGWTPEQQRAERAPRGNENFAGGAWVSLSVGRNKQAEPRWLIP
MLCKAGGLTKRQLGTIKIHDHETHVEIDAASIDAFMSRIGGDGGKLEKQIHVTRISPPSQ
QHEPRQRHEAAPAYTDRPRAKSHHAKPSGKPERARTDAKRPNPKHAGPPPGKKKKWHPAD
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtccgccttcgacaatgtcatccccgcgcttgcgcgcgcgctcaccgcgcgcggcttc
gaagcgctgaccgccgtgcaaagcgccgtgctgtcgcccgacgtgcagggcgaggatctt
gtcgtctccgcgcaaaccggctccggcaaaaccgtcgccttcggcctcacgctcgccaac
accttgctcgacggccaagccaagctcgcgcaacccggcgcgccgcaagcgctcatcatc
gcgccgacgcgcgaactcgccatgcaagtgcgcggcgaactggaatggctctacgcgccc
atcggcggccgtatcgtctcgtgcgtcggcggcatggatatgcgcgacgaacgccgcgct
ttgaaccgaggcgcccacatcgtcgtcggcacgccggggcgtctggtcgatcacatccgc
cgcggctcactcgaaatgcacggcctcaaagccgtcgtgctcgatgaagccgacgagatg
ctcaatctcggcttccgcgaagaactcgaacacatcctcgaagcctcgcccgcagagcgc
cgcacgctcatgttctccgccaccatgccgcgcccgatcgaagcgctggcgcaaaaattc
ttgcgcgacgccgtgcgcctcaacaccggcggcggacagaagcaacacgccgacatcgaa
taccgcgcgctcgttgcgcaagggcacgagtctgagaacgccatcttcaacgtgcttcgc
tactataatccgaccaacgccctcgtcttttgcggcacgcgcgccgccgttacgcgcctt
gagagccgcttctcaaaccgtggcatgtccgtcgtcgcgctctccggcgaactcagccag
aacgcacgcacccacgcgctgcaagccctgcgcgatcaccgcgcccaagtctgcgtcgcc
accgacgtcgccgcgcgcggcatcgatctgccggacctggaactcgtcatccacgccgat
ctacccaagaacaccgaagcactgctgcaccgaagcggccgcaccggccgcgccggccgc
aaaggcgcgagcgttctcattgtgccgtactcagcgcgccgccgcaccgaacgcctgctg
cgcgacgccaacatcaacgccaaatggggcgagccaccgtcagcggacgacatcaaacgc
cgtgatgacgaacgcttgctggctgatccattgctgcaagcgccgccggaagcgtcggat
cagcagatcgttcgcgcattgctcgaccaacacgatcctgtccaaattgccgccgccttt
gtccgcctctaccgcaaagggcaggcggcgcctgaagatctcgcgccaacgcaaggttgg
acgcccgaacagcaacgcgccgaacgcgcgccacgcggtaacgaaaacttcgccggcggc
gcttgggtgtcgctctccgtcggccgcaacaagcaggccgaaccgcgctggctcattcct
atgctctgcaaagccggcggcctgaccaagcgccaactcggcaccatcaaaattcacgat
cacgaaacccacgtcgagatcgacgccgccagcatcgacgccttcatgtcccgcatcggc
ggcgacggcggcaagctggaaaaacaaatccacgtcacccgcatctcaccgccaagccaa
cagcacgaaccccgtcaacgccacgaagccgcgcccgcctacaccgatcgcccccgcgcc
aaatcgcaccacgccaaaccaagcggcaagccggaacgcgcgcgcaccgacgccaagcgc
cccaaccccaaacacgccggcccgccgcccggcaaaaagaaaaagtggcacccagcggac
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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