KEGG   Thiohalobacter thiocyanaticus: FOKN1_2427
Entry
FOKN1_2427        CDS       T05229                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ttc  Thiohalobacter thiocyanaticus
Brite
KEGG Orthology (KO) [BR:ttc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ttc03016]
    FOKN1_2427
Enzymes [BR:ttc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     FOKN1_2427
Transfer RNA biogenesis [BR:ttc03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    FOKN1_2427
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: BAZ94799
UniProt: A0A1Z4VT35
Position
complement(2567071..2567622)
AA seq 183 aa
MAFSQPSDITTDATQRLFFALWPDGGVRERLDAAAAAAARDSGRRVPRGNLHLTLVFLGQ
TPAARRDCMIQAAAAIRCPAFELCLDRFGHFRRARIAWLGPTAPPPALVDLYRQLNAALA
DCGGTPETRPFAPHVTLARKAGRCRAPAEFVPIDWAVRSFALVESPGDGSGYRVLATWPL
AAA
NT seq 552 nt   +upstreamnt  +downstreamnt
atggccttctcgcagccctcggacatcacgactgacgcgacgcagcggctgttcttcgcc
ctgtggccggacggcggggtgcgcgagcggctcgatgccgcggccgcggccgcggcccgg
gacagcggccggcgggtcccgcggggcaacctgcacctgaccctggtgttcctgggccag
accccggccgcacggcgcgactgcatgattcaggcggccgcggccatccgctgcccggcc
tttgagttgtgcctggaccgcttcggccacttccgccgtgcccgcatcgcctggctggga
ccgaccgcgccgccgccggcgctggtcgatctgtaccggcagctgaacgcggccctggcc
gactgcggcggcacgccggagacccggcctttcgcgccgcacgtcaccctggcgcgcaag
gccggacgctgccgggccccggcggaattcgtgcccatcgactgggcggtgcgcagcttc
gccctggtggagtcccccggcgacggcagcggctaccgggtgctggcgacctggccgctg
gccgctgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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