KEGG   Thermococcus thioreducens: A3L14_08655
Entry
A3L14_08655       CDS       T05104                                 
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
ttd  Thermococcus thioreducens
Pathway
ttd03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ttd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A3L14_08655 (tfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttd03021]
    A3L14_08655 (tfb)
Transcription machinery [BR:ttd03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     A3L14_08655 (tfb)
 Prokaryotic type
  Archaeal type
    TFB
     A3L14_08655 (tfb)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Sigma70_r4 Prim_Zn_Ribbon RUBY_RBDX HTH_AsnC-type RB_B HTH_Tnp_ISL3 Zn_Tnp_IS1595 ADK_lid FtrD-like Ribosomal_S27e FYDLN_acid OrfB_Zn_ribbon Auto_anti-p27
Other DBs
NCBI-ProteinID: ASJ12951
UniProt: A0A0Q2M146
Position
complement(1582460..1583359)
AA seq 299 aa
MSKRRVCPVCGSTEFIYDPGRGEVVCKVCGYVIEENVIDMGPEWRAFDASQREKRARVGA
PESILLHDKGLSTDIGIDRNLSGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIA
SQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEIADISR
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSERVRRRAIAILDEAYDKG
LTSGKSPAGLVAAALYIAGLLEDEKRTQREVAEVARVTEVTVRNRYKELVDKLNLKIPV
NT seq 900 nt   +upstreamnt  +downstreamnt
gtgagcaagcgtagggtctgcccggtctgcggctcgacggagttcatctacgacccgggt
aggggagaggtcgtctgtaaggtttgcggttacgttattgaggagaacgtcatagatatg
ggccccgaatggcgcgcttttgacgcgagccagagggagaaaagggcgcgcgttggtgcc
ccggagagcattcttctgcacgacaagggtctttcgaccgacatcggcatagacaggaac
ctctccggacttatgcgcgagaagatgtacagacttagaaagtggcagtcccgcttgagg
gtaagcgatgcggccgagcgtaaccttgccttcgctttgagcgagctggatagaatagcc
tcacagctcaagctcccgaggcacgttgaggaagaggccgcgaggctctaccgtgaggcc
gtcaggaagggcctcataaggggacgctccatagagagcgtcatagcggcatgtgtctac
gccgcctgcagactcctcaaggttccgagaaccctcgacgagatagccgacatatcccgt
gttgacaagaaggagataggcaggagcttccgctttattgccagaaacctcaacctcacg
ccaaagaagctcttcgttaagcccactgactacgtcaacaagttcgccgatgagctgggg
ctcagcgagagggtgcggaggagggccatagccatacttgacgaggcctacgataaagga
ctgacgagcggaaagagccccgcgggtctggttgcggcggcgctatacattgccggtttg
cttgaggacgagaagaggacccagcgggaagttgcggaagtcgcccgcgtcaccgaggtc
accgtcagaaaccgctacaaggagcttgtggacaagctcaaccttaagattccggtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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