KEGG   Caldanaerobacter subterraneus subsp. tengcongensis: TTE0097
Entry
TTE0097           CDS       T00081                                 
Symbol
HolB
Name
(GenBank) ATPase involved in DNA replication
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
tte  Caldanaerobacter subterraneus subsp. tengcongensis
Pathway
tte03030  DNA replication
tte03430  Mismatch repair
tte03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TTE0097 (HolB)
   03430 Mismatch repair
    TTE0097 (HolB)
   03440 Homologous recombination
    TTE0097 (HolB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tte03032]
    TTE0097 (HolB)
   03400 DNA repair and recombination proteins [BR:tte03400]
    TTE0097 (HolB)
Enzymes [BR:tte01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TTE0097 (HolB)
DNA replication proteins [BR:tte03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TTE0097 (HolB)
DNA repair and recombination proteins [BR:tte03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TTE0097 (HolB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C AAA_5 AAA Sigma54_activ_2 AAA_2 Protoglobin RecG_N DUF5667
Other DBs
NCBI-ProteinID: AAM23401
UniProt: Q8RDE3
Position
98846..99808
AA seq 320 aa
MYGHEEILKVFRNIINQNKISNAYLFVGEEGLGKRFLAEYFAMMVNCKGNDKPCFKCTSC
VKMLKKSHPDVFIIEPEGDSIKVETVRYINAEINIKPYESFKKVFIIDRADKMTPAAQNA
FLKTLEEPPLYGLFILISPQIEALLPTVVSRCNVVRFKRERKEVIKEYLIGEKGVSEEEA
EVLAHLADGNFGEADKLVDENYKKLRSNVLSEIEKIFEKKGFEVLNEYSFFEENKEQIEE
VLKIFLSYLRDVLVFKTTKDLKFIKNVDYIDSIEKLESKLTFKRLNNIINRIEQFNSQLK
SNVNYQLAVENLLLDILGGQ
NT seq 963 nt   +upstreamnt  +downstreamnt
gtgtatggccacgaagagattctaaaagtatttcgcaatataataaatcagaataaaatt
tctaatgcctacttatttgttggggaagaaggtttaggaaagagatttttggctgaatat
tttgcaatgatggtaaactgcaaaggtaatgataagccttgttttaagtgtacctcttgt
gtaaaaatgcttaagaaaagtcatccagatgtgtttataatagaaccagagggagattct
ataaaagtagaaactgtaaggtatataaacgctgaaataaatataaagccttatgagtct
tttaaaaaggtatttataattgacagggctgataaaatgactcctgcagctcagaacgct
tttcttaaaaccttagaagaaccgcctttatacggccttttcatactaatctcacctcaa
atagaagctcttttgcctacagtagtgtcccgctgcaatgtggtaagatttaaaagagaa
agaaaagaagtgattaaagaatacctgattggtgaaaaaggcgtcagcgaagaagaggca
gaagttctggcacatctcgcggatggcaattttggtgaggcggacaaactggtggacgaa
aattataaaaagcttcgcagcaatgtgctttctgagattgagaaaatttttgagaaaaaa
ggttttgaagtgcttaatgagtacagcttttttgaggaaaataaggaacagattgaggag
gttttaaaaatatttctctcttatttaagagatgtgttggtctttaaaacaaccaaagat
ttgaaatttataaagaatgtggattatatagattctatagaaaaattggaatctaagttg
acctttaagagattaaataatataatcaatagaatagagcagtttaattcccagcttaaa
agcaatgtaaactatcagttggctgtagagaatttacttttagatattttagggggtcaa
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (44)   

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