KEGG   Caldanaerobacter subterraneus subsp. tengcongensis: TTE2178
Entry
TTE2178           CDS       T00081                                 
Symbol
RpoE5
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
tte  Caldanaerobacter subterraneus subsp. tengcongensis
Brite
KEGG Orthology (KO) [BR:tte00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tte03021]
    TTE2178 (RpoE5)
Transcription machinery [BR:tte03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TTE2178 (RpoE5)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_23 HTH_16 Sigma70_ECF DUF3881 DUF3102 KilA-N
Other DBs
NCBI-ProteinID: AAM25337
UniProt: Q8R851
Position
2094127..2094657
AA seq 176 aa
MEEKELIYKAKNGNKHALNELLLQNYNTLLGYCIKMTGNPTLAQDIAQDTMLKAILNIKK
FAPEAKFSTWLLKIATNTFKDYLRKHKNVELVEEMSTNNTENIEETAISNLQYKELMNIL
MKLPYEKRATFILKHYYGYKYEEIAQILDCPVGTVRSRLHNAIKEIMKEMERRDLL
NT seq 531 nt   +upstreamnt  +downstreamnt
atggaagagaaagaattgatatataaagccaaaaatggcaataaacacgctctaaatgaa
ctcctcttacaaaactataatactttactgggatattgcattaaaatgacaggcaatcct
acacttgcccaagatattgcacaggatacaatgcttaaagctattttaaatattaaaaaa
tttgcccctgaagctaaattctctacatggcttttaaaaattgccactaatacatttaaa
gattatttaagaaaacataaaaatgttgaacttgttgaagaaatgtctacaaataacacg
gaaaacatagaagaaaccgctatttcaaaccttcaatataaggaactaatgaacatttta
atgaaacttccttatgagaaaagagcaacttttattttaaaacactattatggttacaaa
tacgaagaaattgcacaaatactagattgtcctgtaggaacggtgcgttcgcgtttacac
aatgctataaaagagataatgaaggaaatggaaagaagggatttgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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