KEGG   Thioalkalivibrio paradoxus: THITH_13980Help
Entry
THITH_13980       CDS       T03590                                 

Gene name
rluD
Definition
(GenBank) 23S rRNA pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
tti  Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:tti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tti03009]
    THITH_13980 (rluD)
Enzymes [BR:tti01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     THITH_13980 (rluD)
Ribosome biogenesis [BR:tti03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    THITH_13980 (rluD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: PseudoU_synth_2 S4
Motif
Other DBs
NCBI-ProteinID: AHE99185
UniProt: W0DQR8
Position
complement(3034629..3035636)
Genome map
AA seq 335 aa AA seqDB search
MTVGFYNNVPSPRAAVRARELQQEIPAELAGMRLDAALARVFDGYSRSQLTQWLKQGALT
VDGSQPRPRDAVRGGERVRLRIPDAPASAAQPEAIALEVVHEDAAIVVINKPAGLVVHPA
AGHREGTLVNALLHHAPELSALPRAGIVHRLDKDTTGLLVVARTPAAQTALVRQLQERSV
HREYLALVQGVLISGGTLEAPIGRHPVDRKRMAVVAGGKPAVTHYRVRRRLRAHTLVEVR
LDTGRTHQIRVHMAQIGHPVVGDPVYGGRPRPVRDMEPAAAQALAAFQRQALHAAVLGLR
HPDTGAECRFEAPLPADFQALLDALVADATRAGGA
NT seq 1008 nt NT seq  +upstreamnt  +downstreamnt
atgacagtcggattctacaacaacgtgccttcgccacgcgccgctgtgcgcgcccgagag
ctgcagcaggaaatccccgctgagctggcggggatgcgcctggacgcggcactggcccgg
gtcttcgacggctactcgcgcagccagcttacccaatggctgaagcagggcgcgctgacc
gtcgacggcagccagccccgtccgcgggacgcggtgcgcgggggcgaacgggtgcggctg
cggattcccgatgccccggcctcggctgcgcagcccgaggcgatcgcactcgaagtggtg
catgaagacgccgcgatcgtcgtgatcaacaagcctgccgggctcgtggtgcaccctgct
gcggggcaccgggaggggacgttggtcaatgcgctgctgcatcacgctccggaactgtcg
gcgctgccacgcgcgggaatcgtgcaccggctggacaaggacaccaccgggctgctggtc
gtcgcccgcacgccggccgcccagaccgcgctggtccggcagctgcaggaacggagcgtg
caccgcgaatacctggcattggtgcagggcgtgctgatctccggaggaaccctggaagcg
ccgatcgggcgacatccggtggaccgcaagcggatggcggtggtcgcgggcggcaagccc
gcggtcacccattatcgggtgcggcgccggctgcgcgcgcataccctggtcgaagtgcgg
ctggacaccggccgcacccaccagatccgggtccacatggcgcagatcgggcaccccgtg
gtcggcgacccggtctacggcgggcggccgcgcccggtacgcgacatggagccggccgcc
gcccaggcgctggcggcattccagcgtcaggcgctgcatgccgcggtgctcgggttaagg
catccggacaccggtgccgagtgccgtttcgaggcgccgctgcccgccgacttccaggcg
ctgctcgatgcgctcgtagccgacgcgacccgggccgggggagcgtag

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