KEGG   Thioalkalivibrio paradoxus: THITH_14165
Entry
THITH_14165       CDS       T03590                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
tti  Thioalkalivibrio paradoxus
Pathway
tti03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THITH_14165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tti03021]
    THITH_14165
   03400 DNA repair and recombination proteins [BR:tti03400]
    THITH_14165
Enzymes [BR:tti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     THITH_14165
Transcription machinery [BR:tti03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     THITH_14165
DNA repair and recombination proteins [BR:tti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      THITH_14165
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD
Other DBs
NCBI-ProteinID: AHE99220
UniProt: W0DQU9
Position
complement(3080463..3081455)
AA seq 330 aa
MEMQANELVNKQHIEVEEQNRNKARVVLEPLERGFGHTLGNALRRVLLSSIPGSAIVEVE
IEGVLHEYSAIEGVQEDVVDILLNLKGVALRMHSRDEATLSLRKRGPCVVTAADIALDHD
VEVVNPEHVIATIAKNVELAMSLRLRKGRGYEPVSARRQGEMPDSTIGRLMLDASFSPIR
RVAYRVESARLAQRTDMDRLVLELETNGAIAPDDAVRKAAGILQGQLAPFVDLKETARET
HAVSGGAVDPVLLRPVDELELTVRSANCLKAENIYHIGDLVQRTEVELLRTPNLGKKSLT
EIKDTLASHGLSLGMRLENWPPPGLQEPSE
NT seq 993 nt   +upstreamnt  +downstreamnt
gtggagatgcaagcgaacgagctggtcaacaagcagcacatcgaggtcgaggagcagaac
cgcaacaaggcgcgggtcgtgctcgaaccgctggagcggggcttcggccataccctcggc
aacgcgctgcggcgcgtgctgctgtcgtcgattccgggctctgcgatcgtcgaagtcgag
atcgagggtgtgctgcacgaatactcggcaatcgagggcgtgcaggaggatgtggtcgac
attctgctgaacctgaagggtgtggcattgcgtatgcacagccgcgacgaagcgacgctg
tcgttgcgcaagcgcggtccctgcgtggtgaccgcggccgacatcgcgctggaccacgac
gtcgaagtcgtgaatcccgagcacgtgatcgcgacgattgcgaagaacgtcgagctggcg
atgtcgctgcgactgcgcaaggggcgcggctacgagccggtgagcgcgcggcggcagggc
gagatgccggacagcacgatcgggcggctgatgctcgacgcgagcttcagcccgatccgt
cgggtcgcgtatcgggtcgagagcgcgcggctggcgcagcggaccgacatggaccggctc
gtgctggaactcgagaccaatggcgcgatcgcgccggacgacgcggtgcgcaaggcagcg
gggatcctgcagggccagctggcaccgtttgtcgatctgaaggaaacggcgcgggagacg
cacgcggtcagcggcggcgcagtcgatccggtgctgctgcggccggtcgacgaactggag
ctgaccgtgcgttcggcgaactgcctgaaggccgagaatatctaccatattggcgatctg
gtgcagcgcaccgaagtcgagttgctgcgcacgccgaatctcgggaagaagtcgctgacc
gagatcaaggacacgctggccagtcacggcctctcgctggggatgcggctcgaaaactgg
ccgccgcccgggctccaggaaccttccgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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