KEGG   Thermus thermophilus HB8: TTHA0788
Entry
TTHA0788          CDS       T00220                                 
Symbol
TTHA0788
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
ttj  Thermus thermophilus HB8
Pathway
ttj03030  DNA replication
ttj03430  Mismatch repair
ttj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ttj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TTHA0788 (TTHA0788)
   03430 Mismatch repair
    TTHA0788 (TTHA0788)
   03440 Homologous recombination
    TTHA0788 (TTHA0788)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ttj03032]
    TTHA0788 (TTHA0788)
   03400 DNA repair and recombination proteins [BR:ttj03400]
    TTHA0788 (TTHA0788)
Enzymes [BR:ttj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TTHA0788 (TTHA0788)
DNA replication proteins [BR:ttj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TTHA0788 (TTHA0788)
DNA repair and recombination proteins [BR:ttj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TTHA0788 (TTHA0788)
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta GGDEF_2 HD_5 DNA_pol3_delt_C
Other DBs
NCBI-ProteinID: BAD70611
UniProt: Q5SMG4
Position
1:complement(754477..755355)
AA seq 292 aa
MVIAFTGDPFLAREALLEEARLRGLSRFTEPTPEALAQALAPGLFGGGGAMLDLREVGEA
EWKALKPLLESVPEGVPVLLLDPKPSPSRAAFYRNRERRDFPTPKGKDLVRHLENRAKRL
GLRLPGGVAQYLASLEGDLEALERELEKLALLSPPLTLEKVEKVVALRPPLTGFDLVRSV
LEKDPKEALLRLRRLKEEGEEPLRLLGALSWQFALLARAFFLLRENPRPKEEDLARLEAH
PYAARRALEAAKRLTEEALKEALDALMEAEKRAKGGKDPWLALEAAVLRLAG
NT seq 879 nt   +upstreamnt  +downstreamnt
atggtcatcgccttcaccggggatcccttcctggcgcgggaggccctcttagaggaggcc
aggcttaggggcctttcccgcttcaccgagcccaccccggaggccctggcccaggccctg
gccccagggcttttcgggggcgggggggcgatgctggacctgagggaggtgggggaggcg
gagtggaaggccctaaagccccttttggaaagcgtgcccgagggcgtccccgtcctcctc
ctggaccctaagccaagcccctcccgggcggccttctaccggaaccgggaaaggcgggac
ttccccacccccaaggggaaggacctggtgcggcacctggaaaaccgggccaagcgcctg
gggctcaggctcccgggcggggtggcccagtacctggcctccctggagggggacctcgag
gccctggagcgggagctggagaagcttgccctcctctccccacccctcaccctggagaag
gtggagaaggtggtggccctgaggccccccctcacgggctttgacctggtgcgctccgtc
ctggagaaggaccccaaggaggccctcctgcgcctcaggcgcctcaaggaggagggggag
gagcccctcaggctcctcggggccctctcctggcagttcgccctcctcgcccgggccttc
ttcctcctccgggaaaaccccaggcccaaggaggaggacctcgcccgcctcgaggcccac
ccctacgccgcccgccgcgccctggaggcggcgaagcgcctcacggaagaggccctcaag
gaggccctggacgccctcatggaggcggaaaagagggccaagggggggaaagacccgtgg
ctcgccctggaggcggcggtcctccgcctcgccggttga

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